DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and rho2

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_594569.1 Gene:rho2 / 2542773 PomBaseID:SPAC16.01 Length:200 Species:Schizosaccharomyces pombe


Alignment Length:173 Identity:83/173 - (47%)
Similarity:114/173 - (65%) Gaps:0/173 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|||||||.|||.||..:|...||:|||||||:||.....:.|:...|.|:||||||:|:||||
pombe    10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRP 74

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 134
            :||.:..:.||.|::.||.|.|||..||:.||...|...||:|||.:.|||.:...:|::.:..|
pombe    75 MSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPVAIEEMRRRNQ 139

  Fly   135 KPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 177
            ..:..:|.|.:|:.:.|.||:|||:||..|:.:||:.|..|||
pombe   140 NFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAAL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 81/171 (47%)
rho2NP_594569.1 Rho2 8..199 CDD:206702 83/173 (48%)

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