DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and Rhof

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_780301.1 Gene:Rhof / 23912 MGIID:1345629 Length:211 Species:Mus musculus


Alignment Length:192 Identity:86/192 - (44%)
Similarity:124/192 - (64%) Gaps:4/192 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            :|.|:||||..|||.||:.|....||..|.|:||:.|..:|.:|.:..||.|:||||||||||||
Mouse    20 LKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLR 84

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||||..|.:.|:|:.|::|:|::||..||.||:||.|:..|.:|:|.:.|||.:...|.||...:
Mouse    85 PLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQ 149

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEA---ILAALEPPEPTKK-RKCKFL 191
            .:|||..||....::::...|:||||..::.:::||.||   .|:||:..:..|| |.|..|
Mouse   150 LEPITYTQGLNACEQMRGALYLECSAKFRENVEDVFREAAKVALSALKKAQRQKKHRICLLL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 79/175 (45%)
RhofNP_780301.1 Rho4_like 17..211 CDD:206704 85/190 (45%)
Effector region. /evidence=ECO:0000255 48..56 4/7 (57%)

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