DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and Rnd1

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_766200.1 Gene:Rnd1 / 223881 MGIID:2444878 Length:232 Species:Mus musculus


Alignment Length:179 Identity:70/179 - (39%)
Similarity:102/179 - (56%) Gaps:1/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69
            |.|:|||...|||.:|.....:.:|..||||||:||...:....:...|.|:||:|...||.:||
Mouse    15 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYYDNVRP 79

  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 134
            |.|..:|..|:||.:..|.:.::..:||..||..:|..|..||:|.:.|||.:.|||.:|:..||
Mouse    80 LCYSDSDAVLLCFDISRPETMDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQ 144

  Fly   135 KPITMEQGEKLAKELKAVKYVECSALT-QKGLKNVFDEAILAALEPPEP 182
            .||:.|||..:||:|.|..|:|.||.| :..:.::|..|.:..|....|
Mouse   145 APISYEQGCAIAKQLGAEIYLEGSAFTSETSIHSIFRTASMVCLNKSSP 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 68/172 (40%)
Rnd1NP_766200.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..232 CDD:476819 70/179 (39%)
Effector region. /evidence=ECO:0000255 42..50 6/7 (86%)

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