DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and mig-2

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_509931.1 Gene:mig-2 / 181344 WormBaseID:WBGene00003239 Length:195 Species:Caenorhabditis elegans


Alignment Length:188 Identity:114/188 - (60%)
Similarity:143/188 - (76%) Gaps:0/188 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            |||||||||.|||||:||||||:.||.:|||||||||:..:.:.|....|||:||||||||||||
 Worm     8 IKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDRLR 72

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            ||||||||||::|||||||.||:||..||:|||..||...|.:||||::|||||...:..|....
 Worm    73 PLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDLRDEAEPMRALQAEG 137

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCKFL 191
            :.||:..||.|:|:::|||||:|||||||:||..||::|:.:.|.|....||:.|..:
 Worm   138 KSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHPKPQKKKKSCNIM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 109/172 (63%)
mig-2NP_509931.1 RHO 10..183 CDD:197554 108/172 (63%)

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