DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and LOC1276933

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_316343.4 Gene:LOC1276933 / 1276933 VectorBaseID:AGAMI1_014642 Length:190 Species:Anopheles gambiae


Alignment Length:189 Identity:74/189 - (39%)
Similarity:111/189 - (58%) Gaps:22/189 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLS 71
            ||||||||||||||.:||...|.:.|.||::|..::.:::.|:.||:.|.||||||:||::|...
Mosquito     9 VVVGDGAVGKTCLLHAYTDKSFKNFYEPTIYDKESIEMILDGQKYTIQLHDTAGQEEYDKIRQQF 73

  Fly    72 YPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKT----PFLLVGTQIDLRDENSTLEKLAKN 132
            |.:.|.||:|:|:.:..||||...||:|||     ||    |.:|:||::|.|          |.
Mosquito    74 YKRADCFLLCYSIDNRVSFENASTKWIPEI-----KTNPPVPIVLLGTKLDNR----------KG 123

  Fly   133 KQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL---EPPEPTKKRKC 188
            |...::..:|::|.:.:.|..:|||||...:.::...:|.:.|.|   ..|||.....|
Mosquito   124 KNNEVSTGEGDRLKRAINANSFVECSAKDYRNVELAIEEGVRACLMGVPEPEPEDSWAC 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 69/173 (40%)
LOC1276933XP_316343.4 Rho 7..166 CDD:206641 68/171 (40%)

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