DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc42 and Rhod

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_031511.1 Gene:Rhod / 11854 MGIID:108446 Length:210 Species:Mus musculus


Alignment Length:175 Identity:79/175 - (45%)
Similarity:115/175 - (65%) Gaps:0/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRL 67
            ::|.|:||||..|||.|::.:....||..|.||||:.|..|:.:.|:|..|.::|||||:|||||
Mouse    17 SVKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRL 81

  Fly    68 RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKN 132
            |||.||..:|.|:||.|.:|:||:||..:|.||:||.|:..|.::||.:||||.:...:..|.|.
Mouse    82 RPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKK 146

  Fly   133 KQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 177
            :.:|:|..:|..:|:.:.||.|:||||.....::.||.||...||
Mouse   147 RLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEAAEVAL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 77/173 (45%)
RhodNP_031511.1 Rho4_like 17..208 CDD:206704 79/175 (45%)
Effector region. /evidence=ECO:0000255 46..54 5/7 (71%)

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