DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc42 and rhoj

DIOPT Version :10

Sequence 1:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_017952315.1 Gene:rhoj / 100125013 XenbaseID:XB-GENE-957540 Length:214 Species:Xenopus tropicalis


Alignment Length:185 Identity:122/185 - (65%)
Similarity:148/185 - (80%) Gaps:2/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLR 68
            :||||||||||||||||:||..:.||.:|||||||:||||:.:||:.|.|||:|||||||||:||
 Frog    22 LKCVVVGDGAVGKTCLLMSYANDAFPEQYVPTVFDHYAVTITVGGKQYLLGLYDTAGQEDYDQLR 86

  Fly    69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNK 133
            |||||.|||||:|||||:|:|:.||.|:||.|:.......|::|:||||||||:..||.:|...|
 Frog    87 PLSYPNTDVFLICFSVVNPASYHNVHEEWVSELRACMPHVPYVLIGTQIDLRDDPITLARLLHMK 151

  Fly   134 QKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKC 188
            :||||.|||.||||.:.|..|:|||||||||||||||||||....|.:  |||:|
 Frog   152 EKPITQEQGMKLAKMIGAQCYLECSALTQKGLKNVFDEAILTVFHPKK--KKRRC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 117/172 (68%)
rhojXP_017952315.1 Tc10 22..195 CDD:206707 117/172 (68%)

Return to query results.
Submit another query.