DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mer and Inava

DIOPT Version :10

Sequence 1:NP_523413.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_083148.4 Gene:Inava / 67313 MGIID:1921579 Length:663 Species:Mus musculus


Alignment Length:396 Identity:79/396 - (19%)
Similarity:121/396 - (30%) Gaps:150/396 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 PDTMEIQQMKAQAKE-EKQRRQIE----------RKKFIREKKLR------------EKAEHER- 347
            ||: .:..||..... .||:|.:|          |:..:||.:|.            |||...| 
Mouse   105 PDS-PVSPMKELTNAVRKQQRALEARLEACLEELRRLCLREAELTGTLPAEYPLKPGEKAPKVRR 168

  Fly   348 -----YELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTE-----CKANHFKTE 402
                 |:|::...|.:       |.|...|....|          |:|:||     |...:...:
Mouse   169 RIGAAYKLDEWALHRE-------DPLSSLERQLAL----------QLQITEAARRLCAEENLSRQ 216

  Fly   403 MDRLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAE-----TEKLRKELICAKMAEREA 462
            ..|.|:.....|      |||:||.     |..:.:.:|.:|     ...|.:||..        
Mouse   217 ARRQRKHAALQE------EKKLRDL-----QRCLGDRRRNSEPPPTTVPSLGRELSA-------- 262

  Fly   463 TARLLEFLNSGRKSSTDSLLTASSVSHAAN-TASSMAAISTPSLITSSSTNDLETAGGAELTTHS 526
                     |...|.:|.||.....|.|.. ...|.|..|.|  :...|...|:..         
Mouse   263 ---------SDDSSLSDGLLLEEEDSQAPKPPPESPAPPSRP--LPPQSLEGLQPT--------- 307

  Fly   527 SHYLVQGDNSSGISDDFEPKEFILTDNEMEQITNE-MERNHLDYLRNSKQVQSQLQTLRSEIAPH 590
                  |..|.|              .|...|.|. .:...||:.....:..|:|.:..|  :|.
Mouse   308 ------GPESGG--------------QERAPIQNSPWKETSLDHPYEKPRKSSELSSESS--SPA 350

  Fly   591 KIEENQSN------LDILS-----------------------EAQIKAGENKYSTLKKLKSGST- 625
            ...::|.|      ||..|                       |.|.:.|:::...:...::|:. 
Mouse   351 TTPQDQPNPSSLWVLDAASYHVVPIRNVPGQRQGRTSAPATPEMQGRRGQSQSLRVDSFRAGAEG 415

  Fly   626 KARVAF 631
            :.|.||
Mouse   416 RGRSAF 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_523413.1 B41 14..216 CDD:214604
FERM_C_ERM 210..306 CDD:270015
ERM_helical 340..459 CDD:466641 30/146 (21%)
ERM_C 559..635 CDD:459932 19/104 (18%)
InavaNP_083148.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73
CUPID 87..216 CDD:463360 28/128 (22%)
Nuclear localization signal (NLS) 1. /evidence=ECO:0000250|UniProtKB:Q3KP66 164..170 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..363 41/204 (20%)
Nuclear localization signal (NLS) 2. /evidence=ECO:0000250|UniProtKB:Q3KP66 332..338 0/5 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..405 3/29 (10%)
Nuclear localization signal (NLS) 3. /evidence=ECO:0000250|UniProtKB:Q3KP66 422..428 79/396 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..483
Blue background indicates that the domain is not in the aligned region.

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