DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mer and ezr

DIOPT Version :9

Sequence 1:NP_001285458.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001025629.1 Gene:ezr / 595017 XenbaseID:XB-GENE-484766 Length:582 Species:Xenopus tropicalis


Alignment Length:638 Identity:257/638 - (40%)
Similarity:378/638 - (59%) Gaps:70/638 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RSLSVRVSTFDSELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKMEKRVRD 74
            :.::|||:|.|:||||.::|..:|:.|||.|.:|:||||.||||||.:|.:..::|||::|:|..
 Frog     3 KPVNVRVTTMDAELEFAIQPSTTGKQLFDQVIKTVGLREVWYFGLQCIDNKGYLTWLKLDKKVSA 67

  Fly    75 QRVELHASNNVYVFSFYAKFFPENVSEELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLASYA 139
            |.|:   ..|...|.|.|||:||:|||||||||||.|||||||::|||.::||.||.:|||||||
 Frog    68 QEVK---KENPLQFKFRAKFYPEDVSEELIQEITQKLFFLQVKEAILSDEVYCPPETAVLLASYA 129

  Fly   140 VHVQYGPYDYETYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEMEYLKI 204
            |..::|.|..||.|.|.|....|||:.|.||:.::.:.|||||:.|:.:|..|.:::..:|||||
 Frog   130 VQAKFGDYSKETIKSGYLTSERLLPQRVLDQHNLSRDQWEERIEVWHSEHRGMLKEDAMLEYLKI 194

  Fly   205 AQDLDMYGVNYFPITNKNKTKLWLGVTSVGLNIYDERDKLTPKTTFQWNEIRHVSFDDKKFTIRL 269
            ||||:|||:|||.|.||..:.|||||.::|||||:..||||||..|.|:|||::||:||||.|:.
 Frog   195 AQDLEMYGINYFEIKNKKGSDLWLGVDALGLNIYEHNDKLTPKIGFPWSEIRNISFNDKKFVIKP 259

  Fly   270 VDAKVSNFIFYSQDLHINKMILDLCKGNHDLYMRRRKPDTMEIQQMKAQAKEEKQRRQIERKKFI 334
            :|.|..:|:||:..|.|||.||.||.|||:||||||||||:|:|||||||||||.::|:||::..
 Frog   260 IDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAKEEKLQKQLERQQLE 324

  Fly   335 REKKLREKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECKANHF 399
            :|||.||..|.||.::.|..|.|...:....:..:|:|.......::::..||:.:..:.:|   
 Frog   325 QEKKKREAIEREREQMIKEKEELMFRLHEYEEQSKRAERELSEQIQRAKELEEERRRAQYEA--- 386

  Fly   400 KTEMDRLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAETEKLRKELICAKMAEREATA 464
                :||...::...|.|.:||                   |:|..:...:|.:.::::|..|..
 Frog   387 ----ERLEAERISALRAKEELE-------------------RQAIAQTKSQEQLASELSEYTARI 428

  Fly   465 RLL------------EFLNSGRKSSTDSLLTASSVSHAANTASSMAAISTPSLITSSSTNDLETA 517
            .||            |:....:::.||.|.|...:.....|...    ..|.:......:  |..
 Frog   429 SLLEEARRVKEDEASEWQMRAQEAQTDLLRTREELHMVMTTPPP----PPPPVYEPYRVH--EPD 487

  Fly   518 GGAELTTHSSHYLVQGDNSSGISDDFEPKEFILTDNEMEQITNEMERNHLDYLRNSKQVQSQLQT 582
            .|.|.|::|:..         .|.||      |.||:|:....|.|:|        ::||.||..
 Frog   488 DGLEHTSYSAEL---------SSVDF------LEDNKMQTRMTEAEKN--------ERVQRQLMA 529

  Fly   583 LRSEIAPHKIEENQSNLDILSEAQIKAGENKYSTLKKLKSGSTKARVAFFEEL 635
            |.||::..:.|..:::.|||....:|:|.:||.||::::.|:||.|:..||.:
 Frog   530 LTSELSQARDETKKTHNDILHTENVKSGRDKYKTLRQIRQGNTKQRIDEFEAM 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_001285458.1 B41 14..216 CDD:214604 109/201 (54%)
FERM_C_ERM 210..306 CDD:270015 58/95 (61%)
ERM 341..635 CDD:395622 70/305 (23%)
ezrNP_001025629.1 B41 7..206 CDD:214604 109/201 (54%)
FERM_C_ERM 200..296 CDD:270015 58/95 (61%)
ERM 338..582 CDD:366293 66/298 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281811at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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