DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mer and ezrb

DIOPT Version :10

Sequence 1:NP_523413.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001025456.1 Gene:ezrb / 561589 ZFINID:ZDB-GENE-050803-1 Length:583 Species:Danio rerio


Alignment Length:632 Identity:265/632 - (41%)
Similarity:385/632 - (60%) Gaps:57/632 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RSLSVRVSTFDSELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKMEKRVRD 74
            :.::|||:|.|:||||.::|..:|:.|||.|.:||||||.|||||||:|::..::|||::|:|..
Zfish     3 KPVNVRVTTMDAELEFAVQPSTTGKQLFDQVVKTIGLREIWYFGLQYMDSKGYLTWLKLDKKVSS 67

  Fly    75 QRVELHASNNVYVFSFYAKFFPENVSEELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLASYA 139
            |.|:   ..|...|.|.||||||:|::||||:|||.|||:|||..|||.:|||.||.:||||||:
Zfish    68 QDVK---KENPLQFKFRAKFFPEDVADELIQDITQKLFFMQVKDGILSDEIYCPPETAVLLASYS 129

  Fly   140 VHVQYGPYDYETYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEMEYLKI 204
            |..::|.:..|.::.|.|....|||:.|.||::::.|.|||||:.|:.:|..|.|::..:|||||
Zfish   130 VQAKFGDFSKELHRPGYLTSERLLPQRVLDQHKLSREQWEERIQVWHEEHRGMLREDAMLEYLKI 194

  Fly   205 AQDLDMYGVNYFPITNKNKTKLWLGVTSVGLNIYDERDKLTPKTTFQWNEIRHVSFDDKKFTIRL 269
            ||||:|||||||.|.||..|:|||||.::|||||::.||||||..|.|:|||::||:||||.|:.
Zfish   195 AQDLEMYGVNYFDIKNKKGTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDKKFVIKP 259

  Fly   270 VDAKVSNFIFYSQDLHINKMILDLCKGNHDLYMRRRKPDTMEIQQMKAQAKEEKQRRQIERKKFI 334
            :|.|..:|:||:..|.|||.||.||.|||:||||||||||:|:|||||||:||||::|:||.:..
Zfish   260 IDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKQQKQMERAQLE 324

  Fly   335 REKKLREKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECKANHF 399
            .|||.||..|.|:.::|:..:.|..::      .:..|.||::..|.    :||||         
Zfish   325 NEKKRREAIEREKEQMEREKKELMMQL------YQFEERTKKVENEL----QEQMQ--------- 370

  Fly   400 KTEMDRLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAETEKLRKELICAKMAEREATA 464
                   |..|::.||...|.|....:|:.....|..|...|:|:.:...:|.:.|::||..|..
Zfish   371 -------RAMQLQHERRLADEEAARLEAERQAALLAKEELARQAQDQLKSQEQLAAELAEYTAKI 428

  Fly   465 RLLEFLNSGRKSSTDSLLTASSVSHAANTASSMAAISTPSLI-TSSSTNDLETA----GGAELTT 524
            .|||   ..:|...:.          |.|..:.|.::...|| |....:::.||    .......
Zfish   429 SLLE---EAKKRKEEE----------AQTWQNKAQLAQDDLIKTRQELHNVMTAPPLPPPPPAYD 480

  Fly   525 HSSHYLVQGDNSSG-ISDDFEPKEFILTDNEMEQITNEMERNHLDYLRNSKQVQSQLQTLRSEIA 588
            |..:.|..|:.|:| .:.|.:...|.....|.|:|| |.|:|        ::||.||..|.||:|
Zfish   481 HDENDLDDGEESNGSYTADLQTGGFNDHRLEEERIT-EAEKN--------ERVQKQLLALTSELA 536

  Fly   589 PHKIEENQSNLDILSEAQIKAGENKYSTLKKLKSGSTKARVAFFEEL 635
            ..:.:..::..|:|....::||.:||.||::::.|:||.|:..||.|
Zfish   537 QARDDTKKTQNDLLHTENVRAGRDKYKTLRQIRQGNTKQRIDEFEAL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_523413.1 B41 14..216 CDD:214604 108/201 (54%)
FERM_C_ERM 210..306 CDD:270015 60/95 (63%)
ERM_helical 340..459 CDD:466641 27/118 (23%)
ERM_C 559..635 CDD:459932 26/75 (35%)
ezrbNP_001025456.1 B41 7..206 CDD:214604 108/201 (54%)
FERM_C_ERM 200..296 CDD:270015 60/95 (63%)
ERM_helical 337..456 CDD:466641 33/157 (21%)
ERM_C 507..583 CDD:459932 29/84 (35%)

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