DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mer and ezra

DIOPT Version :9

Sequence 1:NP_001285458.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001018326.1 Gene:ezra / 403009 ZFINID:ZDB-GENE-050522-18 Length:595 Species:Danio rerio


Alignment Length:654 Identity:263/654 - (40%)
Similarity:381/654 - (58%) Gaps:89/654 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RSLSVRVSTFDSELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKMEKRVRD 74
            :.::|||:|.|:||||.::...:|:.||:.|.:|:||||.||||||:.|.:..::|||::|:|..
Zfish     3 KPINVRVTTMDAELEFAIQSVTTGKQLFEQVVKTVGLREIWYFGLQFTDNKGFLTWLKLDKKVSS 67

  Fly    75 QRVELHASNNVYVFSFYAKFFPENVSEELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLASYA 139
            |.|:   ..|...|.|.||.:||:|||||||:||:.|||||||:||||.:|||.||.:|||||||
Zfish    68 QEVK---QENPLQFKFRAKHYPEDVSEELIQDITKKLFFLQVKESILSDEIYCPPETAVLLASYA 129

  Fly   140 VHVQYGPYDYETYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEMEYLKI 204
            |..::|.:..||:|.|.|:...|||:.|.||::::.|.|||||:.|:.:|..:.:::..:|||||
Zfish   130 VQSKFGDFTPETHKTGYLSSERLLPQRVLDQHKLSKEQWEERIQIWHEEHRGILKEDSMLEYLKI 194

  Fly   205 AQDLDMYGVNYFPITNKNKTKLWLGVTSVGLNIYDERDKLTPKTTFQWNEIRHVSFDDKKFTIRL 269
            :|||:|||||||.|.||..|.|||||.::|||||::.|:||||..|.|:|||::||:||||.|:.
Zfish   195 SQDLEMYGVNYFDIKNKKGTDLWLGVDALGLNIYEKDDRLTPKIGFPWSEIRNISFNDKKFIIKP 259

  Fly   270 VDAKVSNFIFYSQDLHINKMILDLCKGNHDLYMRRRKPDTMEIQQMKAQAKEEKQRRQIERKKFI 334
            :|.|..:|:||:..|.|||.||.||.|||:|||:||||||:|:|||||||:|||.:||:||.:..
Zfish   260 IDKKAPDFVFYASRLRINKRILQLCMGNHELYMKRRKPDTIEVQQMKAQAREEKHQRQMERAQLE 324

  Fly   335 REKKLREKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECKANHF 399
            .|||.||..|.|:..:||..:.:..::....:..::.|......||::||               
Zfish   325 NEKKKREAIEKEKEMVEKEKQEMMMKLYQFEEQTKKVERDLREQFERARV--------------- 374

  Fly   400 KTEMDRLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAETEKLRKELICAKMAEREATA 464
                  |.|.:.|:|.|...||     |:.....:..|...|:||.:...:|.:.|.:||..|..
Zfish   375 ------LEEERRKVEEEAARLE-----AERQAALMAKEELARQAEDQMKTQEQLAADLAEYTAKL 428

  Fly   465 RLL------------EFLNSGRKSSTDSLLT--------ASSVSHAANTASSMAAISTPSLITSS 509
            .||            |:.|..::...|...|        ||.|:.|...||..|.::..:::...
Zfish   429 ALLEEARRIKEEEANEWQNRAKEVQDDLEKTREELHNVMASPVAAAPMAASMAAPMAARAMMEEP 493

  Fly   510 STNDLETAGGAELTTHSSHYLVQGDNSS--------GISDDFEPKEFILTDNEMEQITNEMERNH 566
            ..||           |..|   :.:||:        ||.|.         .||.|:|| |.|:| 
Zfish   494 LEND-----------HEDH---EENNSTYSAELPVEGIEDH---------RNEEERIT-EAEKN- 533

  Fly   567 LDYLRNSKQVQSQLQTLRSEIAPHKIEENQSNLDILSEAQIKAGENKYSTLKKLKSGSTKARVAF 631
                   ::||.||..|.||:|..:....::..|||....::||.:||.||::::.|:||.|:..
Zfish   534 -------ERVQKQLMALSSELAEARDNTKKTQNDILHSENVQAGRDKYKTLRQIRMGNTKQRIDE 591

  Fly   632 FEEL 635
            ||.|
Zfish   592 FEAL 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_001285458.1 B41 14..216 CDD:214604 105/201 (52%)
FERM_C_ERM 210..306 CDD:270015 58/95 (61%)
ERM 341..635 CDD:395622 80/321 (25%)
ezraNP_001018326.1 B41 7..206 CDD:214604 105/201 (52%)
FERM_N 9..71 CDD:286467 29/61 (48%)
FERM_M 91..206 CDD:278785 64/114 (56%)
FERM_C_ERM 200..296 CDD:270015 58/95 (61%)
ERM 347..595 CDD:279153 75/305 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3529
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281811at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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