DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mer and Frmd7

DIOPT Version :9

Sequence 1:NP_001285458.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001177261.1 Gene:Frmd7 / 385354 MGIID:2686379 Length:703 Species:Mus musculus


Alignment Length:672 Identity:157/672 - (23%)
Similarity:264/672 - (39%) Gaps:152/672 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DSELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKMEKRVRDQRVELHASN- 83
            ||:..|.::.::||:.||:|.|..:.|.|..||||::.....|..||::.|.:..|     ..| 
Mouse    11 DSQKIFVVDQKSSGKALFNLSCGHLNLAEKEYFGLEFCSHSGNNVWLELLKPITKQ-----VKNP 70

  Fly    84 NVYVFSFYAKFFPENVSEELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLASYAVHVQYGPYD 148
            ...||.|..||||.:.. .|.:|:|::||.||:|:.:....:.|....:.|:.|:.:..:.|.:.
Mouse    71 KEVVFKFMVKFFPVDPG-HLREELTRYLFTLQIKKDLALGRLPCSDNCTALMVSHILQSELGDFH 134

  Fly   149 YETYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEMEYLKIAQDLDMYGV 213
            .||.:..:          |..||..:....|.:|..::..|...:..|.::..|.||:.|||||:
Mouse   135 EETVRKHL----------VQTQYLPSQASLESKIMQFHQQHIGRSPAESDILLLDIARKLDMYGI 189

  Fly   214 NYFPITNKNKTKLWLGVTSVGLNIYDERDKLTPKTTFQWNEIRHVSFDDKKFTIRLVDAKVSNFI 278
            ...|.::....::.|.|..:|:.:.....|:   .||.|.:||.:||..|.|.|:          
Mouse   190 RPQPASDGEGMQIHLAVAHMGVLVLRGNTKI---NTFNWAKIRKLSFKRKHFLIK---------- 241

  Fly   279 FYSQDLHINKMILDLCKGNHDLYMRRRKPDTMEIQQMKAQAKEEKQRRQIERKKFIR---EKK-- 338
                 ||.|  ||.|||            ||:|.......|.:...:..:|...|.|   |.|  
Mouse   242 -----LHAN--ILVLCK------------DTLEFTMASRDACKAFWKTCVEYHAFFRLSEEPKSK 287

  Fly   339 ----LREKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECKANHF 399
                |..|....||......:.|:         ..:....|.|.||:                  
Mouse   288 PKTLLCSKGSSFRYSGRTQRQLLE---------YGKKGRLKSLPFER------------------ 325

  Fly   400 KTEMDRLRERQMKIERE-KHDLEKKIRD------ADFY-----VH--QLTVENDKREAETE-KLR 449
            |....:..|||.:...: ..|:.|::.|      :.:|     ||  :..:::.:|.:..| ...
Mouse   326 KQYPSQYHERQCRSSPDILSDVSKQVEDLRLTYGSSYYRNVNGVHASESMLDSRRRNSAVEVTFA 390

  Fly   450 KELICAKMAEREATARLLEFLNSGRKSSTDSLLTASSVSHAANT----------ASSMAAISTPS 504
            .||..:| .|.|||:     |:..:.||:.:.:.|..|   .||          .|.:::..|.|
Mouse   391 AELEHSK-PEAEATS-----LHPSQSSSSFTFIYADPV---FNTDPEPIEFFEERSPLSSFQTTS 446

  Fly   505 LITSSSTNDLETAGGAELTTHSSHYLVQGDNSSGISDDFEPKEFILTDNEMEQITNEM---ERN- 565
            ....|.|:....|  .:||.....|:   ..:|...|...|:.|...|...:.....:   |.| 
Mouse   447 KFADSHTSKASPA--RQLTYTDVPYI---PCTSQKVDIMPPQVFFYVDKPPQVPRRSLIMAEENM 506

  Fly   566 ----HLDYL---------RNS--KQVQSQLQTLRSEIAPHKIEENQSNLDILSEAQIKAGENKYS 615
                ::|:.         ||.  |.:|..||.|:..:|.   ...:||:::..|.:....::.::
Mouse   507 RPDSYVDHSAIKPAKRSPRNMRIKSLQQDLQELQEAMAR---TSGRSNINVEPEEEDPHLDDAFA 568

  Fly   616 ------TLKKLKSGSTKARVAF 631
                  |.|:.:|.|....:.|
Mouse   569 YNLQEQTPKRSQSQSDMKTIRF 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_001285458.1 B41 14..216 CDD:214604 57/196 (29%)
FERM_C_ERM 210..306 CDD:270015 26/95 (27%)
ERM 341..635 CDD:395622 67/341 (20%)
Frmd7NP_001177261.1 FERM_F1_FRMD7 1..86 CDD:340708 28/79 (35%)
FERM_M 85..191 CDD:366056 29/116 (25%)
FERM_C_FARP1-like 179..299 CDD:270014 41/151 (27%)
FA 294..330 CDD:370090 9/62 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3529
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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