DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mer and Nf2

DIOPT Version :10

Sequence 1:NP_523413.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_063128952.1 Gene:Nf2 / 25744 RGDID:3169 Length:653 Species:Rattus norvegicus


Alignment Length:688 Identity:294/688 - (42%)
Similarity:409/688 - (59%) Gaps:110/688 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKNRSLSVRVSTFDSELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKMEKR 71
            |:.::.:||:.|.|:|:||..|.:..|:|||||||||:||||:|:|||||. .:..|:||||:|:
  Rat    17 KQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYT-IKDTVAWLKMDKK 80

  Fly    72 VRDQRVELHASNNVYVFSFYAKFFPENVSEELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLA 136
            |.|..|   :......|.|.|||:|||..|||:|||||||||||||:.||...:||.||||||||
  Rat    81 VLDHDV---SKEEPVTFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKVYCPPEASVLLA 142

  Fly   137 SYAVHVQYGPYDYETYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEMEY 201
            ||||..:||.||...:|.|.||..|||||.|.:.||||||||||||..||.:|....|||.||||
  Rat   143 SYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEY 207

  Fly   202 LKIAQDLDMYGVNYFPIT----------------------------------------------- 219
            |||||||:|||||||.|.                                               
  Rat   208 LKIAQDLEMYGVNYFTIRHSGGRSRRISVSSNVSLKPAWSTELSSRTTRTTQKKLSKTKTEFLAN 272

  Fly   220 ----------NKNKTKLWLGVTSVGLNIYDERDKLTPKTTFQWNEIRHVSFDDKKFTIRLVDAKV 274
                      ||..|:|.|||.::||:|||..::||||.:|.|||||::|:.||:|||:.:|.|:
  Rat   273 LFYLEEEEKYNKKGTELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKI 337

  Fly   275 SNFIFYSQDLHINKMILDLCKGNHDLYMRRRKPDTMEIQQMKAQAKEEKQRRQIERKKFIREKKL 339
            ..|.|.|..|.:||:||.||.|||||:|||||.|::|:|||||||:|||.|:|:||::..|||::
  Rat   338 DVFKFNSSKLRVNKLILQLCIGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQM 402

  Fly   340 REKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECKANHFKTEMD 404
            ||:||..|.|||:.:..::.|..|||:||.|||||.:|..||:::.||:.:|...||...:.||.
  Rat   403 REEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQ 467

  Fly   405 RLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAETEKLRKELICAKMAEREATARLLEF 469
            |::...::.|.||..:|:|:.:|:....::..|:::|..|.::|:::|..|:.|||.|..:|||.
  Rat   468 RIKATAIRTEEEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEI 532

  Fly   470 LNSGRKSSTDSLLTASSVSHAANTASSMAAISTPSLITSSSTNDLETAGGAELTTHSSHYLVQGD 534
            ...                   .|...|..|..|                  |......:.:.||
  Rat   533 ATK-------------------PTYPPMNPIPAP------------------LPPDIPSFDIIGD 560

  Fly   535 NSSGISDDFEPKEFILTDNEMEQITNEMERNHLDYLRNSKQVQSQLQTLRSEIAPHKIEENQSNL 599
            :   :|.||:       |.:|::::.|:|:..::|:..||.:|.||..|::||...|::|.::.|
  Rat   561 S---LSFDFK-------DTDMKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETAL 615

  Fly   600 DIL-SEAQIKAG-ENKYSTLKKLKSGSTKARVAFFEEL 635
            ||| ||...:.| .:|::|:|||...|.|:||||||||
  Rat   616 DILHSEHSDRGGTSSKHNTIKKLTLQSAKSRVAFFEEL 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_523413.1 B41 14..216 CDD:214604 125/201 (62%)
FERM_C_ERM 210..306 CDD:270015 56/152 (37%)
ERM_helical 340..459 CDD:466641 42/118 (36%)
ERM_C 559..635 CDD:459932 33/77 (43%)
Nf2XP_063128952.1 None

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