DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mer and Nf2

DIOPT Version :10

Sequence 1:NP_523413.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_035028.2 Gene:Nf2 / 18016 MGIID:97307 Length:596 Species:Mus musculus


Alignment Length:631 Identity:292/631 - (46%)
Similarity:409/631 - (64%) Gaps:53/631 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKNRSLSVRVSTFDSELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKMEKR 71
            |:.::.:||:.|.|:|:||..|.:..|:|||||||||:||||:|:|||||. .:..|:||||:|:
Mouse    17 KQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYT-IKDTVAWLKMDKK 80

  Fly    72 VRDQRVELHASNNVYVFSFYAKFFPENVSEELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLA 136
            |.|..|   :......|.|.|||:|||..|||:|||||||||||||:.||...:||.||||||||
Mouse    81 VLDHDV---SKEEPVTFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKVYCPPEASVLLA 142

  Fly   137 SYAVHVQYGPYDYETYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEMEY 201
            ||||..:||.||...:|.|.||..|||||.|.:.||||||||||||..||.:|....|||.||||
Mouse   143 SYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEY 207

  Fly   202 LKIAQDLDMYGVNYFPITNKNKTKLWLGVTSVGLNIYDERDKLTPKTTFQWNEIRHVSFDDKKFT 266
            |||||||:|||||||.|.||..|:|.|||.::||:|||..::||||.:|.|||||::|:.||:||
Mouse   208 LKIAQDLEMYGVNYFTIRNKKGTELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSDKEFT 272

  Fly   267 IRLVDAKVSNFIFYSQDLHINKMILDLCKGNHDLYMRRRKPDTMEIQQMKAQAKEEKQRRQIERK 331
            |:.:|.|:..|.|.|..|.:||:||.||.|||||:|||||.|::|:|||||||:|||.|:|:||:
Mouse   273 IKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQ 337

  Fly   332 KFIREKKLREKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECKA 396
            :..|||::||:||..|.|||:.:..::.|..|||:||.|||||.:|..||:::.||:.:|...||
Mouse   338 RLAREKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKA 402

  Fly   397 NHFKTEMDRLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAETEKLRKELICAKMAERE 461
            ...:.||.|::...::.|.||..:|:|:.:|:....::..|:::|..|.::|:::|..|:.|||.
Mouse   403 AEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERR 467

  Fly   462 ATARLLEFLNSGRKSSTDSLLTASSVSHAANTASSMAAISTPSLITSSSTNDLETAGGAELTTHS 526
            |..:|||....                   .|...|..|..|                  |....
Mouse   468 AKQKLLEIATK-------------------PTYPPMNPIPPP------------------LPPDI 495

  Fly   527 SHYLVQGDNSSGISDDFEPKEFILTDNEMEQITNEMERNHLDYLRNSKQVQSQLQTLRSEIAPHK 591
            ..:.:..|:   :|.||:       |.:|::::.|:|:..::|:..||.:|.||..|::||...|
Mouse   496 PSFDIIADS---LSFDFK-------DTDMKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALK 550

  Fly   592 IEENQSNLDIL-SEAQIKAG-ENKYSTLKKLKSGSTKARVAFFEEL 635
            ::|.::.||:| ||:..:.| .:|::|:|||...|.|:||||||||
Mouse   551 LKERETALDVLHSESSDRGGPSSKHNTIKKLTLQSAKSRVAFFEEL 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_523413.1 B41 14..216 CDD:214604 125/201 (62%)
FERM_C_ERM 210..306 CDD:270015 56/95 (59%)
ERM_helical 340..459 CDD:466641 42/118 (36%)
ERM_C 559..635 CDD:459932 32/77 (42%)
Nf2NP_035028.2 B41 23..222 CDD:214604 125/202 (62%)
FERM_C_ERM 216..312 CDD:270015 56/95 (59%)
PLN03086 307..>367 CDD:178635 32/59 (54%)
ERM_helical 346..465 CDD:466641 42/118 (36%)
ERM_C 518..596 CDD:459932 32/77 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..580 6/19 (32%)

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