DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mer and LOC100485014

DIOPT Version :9

Sequence 1:NP_001285458.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_012812993.1 Gene:LOC100485014 / 100485014 -ID:- Length:635 Species:Xenopus tropicalis


Alignment Length:615 Identity:233/615 - (37%)
Similarity:358/615 - (58%) Gaps:62/615 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKNRSLSVRVSTFDSELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKMEKR 71
            |:.::..|::.|.|||:|...|....|..||.|.|.|:||:|||:||||:.....: :|||::|:
 Frog     9 KQLKNFRVKIMTMDSEMELTCEMNWKGSVLFGLACETLGLKESWFFGLQFTSNGMD-TWLKLDKK 72

  Fly    72 VRDQRVELHASNNVYVFSFYAKFFPENVSEELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLA 136
            :..|.:.......   |.|.|||:||||:|||:|:||:||||||||:.||..:|:|.||||||||
 Frog    73 ILQQDLPKEEPTK---FRFLAKFYPENVAEELVQDITRHLFFLQVKKQILDEEIHCLPEASVLLA 134

  Fly   137 SYAVHVQYGPYDYETYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEMEY 201
            .:|:..:||.|:...::.|.|:..||||:.|..|||||.|||:|:|..||.:|....|||.||.|
 Frog   135 LFALQAKYGDYNPNIHQPGFLSKDELLPQRVLQQYQMTSEMWQEKITAWYAEHRGTDRDEAEMNY 199

  Fly   202 LKIAQDLDMYGVNYFPITNKN-KTKLWLGVTSVGLNIYDERDKLTPKTTFQWNEIRHVSFDDKKF 265
            |||||||||:|:|||||:..| .:.:.|||.:.|::|:...:|:.|..:|:|.:||:::::.||.
 Frog   200 LKIAQDLDMFGMNYFPISQSNTDSNILLGVNAKGIHIFSINNKIIPLKSFKWGDIRNINYNYKKL 264

  Fly   266 TIRLVDAKVSNFIFYSQDLHINKMILDLCKGNHDLYMRRRKPDTMEIQQMKAQAKEEKQRRQIER 330
            .|..:..|...|.|||....::|:|.|||.|||.|:|.:||.|:.:|||||.|||.|:.|::||.
 Frog   265 KIIPISRKEDVFKFYSSGHKVDKLIYDLCTGNHRLFMTKRKVDSKDIQQMKNQAKLERTRKKIEH 329

  Fly   331 KKFIREKKLREKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECK 395
            :..:|||:|||.||..:.::|:.:..|::|.|.||:||..|.||.||..||:::.||:.:|....
 Frog   330 QNLLREKQLREDAERAKEDMERRLFQLEDEARQANEALICSNETAELMAEKAQIAEEEAKLLAQN 394

  Fly   396 ANHFKTEMDRLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAETEKLRKELICAKMAER 460
            |...:.||.||....:|.:.|...:|:|:|:||....:|..|:|:|..|.|:|.::|..|:.|||
 Frog   395 AVETRQEMQRLEISVLKSKEEMQLMEQKMREADMITVKLIKESDRRAKEAEQLEQDLRKAREAER 459

  Fly   461 EATARLLEFLNSGRKSSTDSLLTASSVSHAANTASSMAAISTPSLITSSSTNDLETAGGAELTTH 525
            .|..||::                     .::....:||...|..:|                  
 Frog   460 NAKQRLMD---------------------VSSLCQPLAAKCFPLDVT------------------ 485

  Fly   526 SSHYLVQGDNSSGISDDFEPKEFI---LTDNEMEQITNEMERNHLDYLRNSKQVQSQLQTLRSEI 587
                           |.|.....|   .:|.::::::.|:|:..||||..|:|::|||..|::|:
 Frog   486 ---------------DGFIENRIISLDASDTDIKRLSLEIEKERLDYLEKSRQLESQLNDLKTEL 535

  Fly   588 APHKIEENQSNLDILSEAQIKAGENKYSTL 617
            ...|.|:.|.:|..|....:::.::.:..|
 Frog   536 RTLKREDRQLSLQSLWNGTLRSKDHLHDPL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MerNP_001285458.1 B41 14..216 CDD:214604 103/201 (51%)
FERM_C_ERM 210..306 CDD:270015 37/96 (39%)
ERM 341..635 CDD:395622 75/280 (27%)
LOC100485014XP_012812993.1 B41 15..214 CDD:214604 103/202 (51%)
PH-like 208..305 CDD:388408 37/96 (39%)
ERM 340..544 CDD:366293 71/257 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 115 1.000 Domainoid score I5958
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281811at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47465
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4049
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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