DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Ubqln4

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_277068.1 Gene:Ubqln4 / 94232 MGIID:2150152 Length:596 Species:Mus musculus


Alignment Length:615 Identity:291/615 - (47%)
Similarity:393/615 - (63%) Gaps:89/615 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAE--GGSKR--INVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTD 61
            |||  |...|  |.|.|||||||:.:.:.:.:.:|:||..::::|:|:.:||||||||||:||.|
Mouse     1 MAEPSGAETRPQIRVTVKTPKDKEEIVICDQASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGD 65

  Fly    62 TLQMHNIKDNLTVHLVIKAPTRNNE----------------QPARQPADVRQTPFG--------- 101
            ||..|.|||.||||||||.|.:..:                .|:..||.....|..         
Mouse    66 TLSQHGIKDGLTVHLVIKTPQKAQDPVTAAASPPSTPDSASAPSTTPASPAAAPVQPCSSGNTTS 130

  Fly   102 -----------------------LNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNGDMLRSLM 143
                                   |:.|||:.|:.:||.||..||:||.:||.:|::|.:||..:|
Mouse   131 DAGSGGGPSPVAAEGPSSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLSQIM 195

  Fly   144 DNPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSMLQELMRSH 208
            :||:||.||:|||.||.:|.:||||..||:||||||||||||:|:||||||||||:|:||:||:.
Mouse   196 ENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQ 260

  Fly   209 DRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFAGLVDGGGSGAGNNPQQGTENRNP 273
            |||:||||||||||:||:|:|.||||||..||.|.||.|||:.|. |....:.:.|.: ||||.|
Mouse   261 DRALSNLESVPGGYNALRRMYTDIQEPMFTAAREQFGNNPFSSLA-GNSDNSSSQPLR-TENREP 323

  Fly   274 LPNPWG-------GANSGTNGTVGGSGAG--NPTGDLP--------PNNVLNTPAMRSLLQQMAD 321
            |||||.       ...||..|| ||||..  :||...|        .:.:.|:|.|::||||:::
Mouse   324 LPNPWSPSPPTSQAPGSGGEGT-GGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISE 387

  Fly   322 NPAMMQNLLNAPYTRSMMESMSQDPDMAARLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNPEVM 386
            ||.:|||:::|||.|:||::::|:||.||:::.:.||.:.||.||||:|..:|.|:.||||||.:
Mouse   388 NPQLMQNVISAPYMRTMMQTLAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESL 452

  Fly   387 NMLTNPDAMNAILQIQQGMEQLRSAAPGLVGTLGIPPPPPGAGTGTNPASGDGSGGNSGASTNNV 451
            ::||||.||.|:||||||::.|::.|||||.:||        ..||...|...:|.|||:|....
Mouse   453 SILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLG--------SFGTPRTSVPLAGSNSGSSAEAP 509

  Fly   452 SPSSGLNAGTGTPNLAPGGGPNAQLFNDFMMRMLNGMSNNADNTQP-PEVRYQSQLEQLNAMGFV 515
            :.|.|:.|.:     .|..|.|||  ...|.:|:..:|.:.::..| ||||:|.||||||:|||:
Mouse   510 TSSPGVPATS-----PPSAGSNAQ--QQLMQQMIQLLSGSGNSQVPMPEVRFQQQLEQLNSMGFI 567

  Fly   516 NRDANLQALIATFGDINAAVERLLSLNQLS 545
            ||:|||||||||.||||||:||||. :|||
Mouse   568 NREANLQALIATGGDINAAIERLLG-SQLS 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563 39/69 (57%)
hPLIC_N 9..79 CDD:176403 39/69 (57%)
STI1 322..368 CDD:128966 22/45 (49%)
UBA_PLICs 501..537 CDD:270582 28/35 (80%)
Ubqln4NP_277068.1 UBQ 13..83 CDD:214563 39/69 (57%)
hPLIC_N 13..83 CDD:176403 39/69 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..148 4/58 (7%)
STI1 187..224 CDD:128966 20/36 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..361 27/66 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..528 17/58 (29%)
UBA_PLICs 553..592 CDD:270582 31/38 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 399 1.000 Domainoid score I741
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 531 1.000 Inparanoid score I1200
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54270
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001496
OrthoInspector 1 1.000 - - otm42793
orthoMCL 1 0.900 - - OOG6_100933
Panther 1 1.100 - - LDO PTHR10677
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2096
SonicParanoid 1 1.000 - - X761
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.860

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