DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and MDY2

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_014530.1 Gene:MDY2 / 854038 SGDID:S000005471 Length:212 Species:Saccharomyces cerevisiae


Alignment Length:149 Identity:28/149 - (18%)
Similarity:58/149 - (38%) Gaps:44/149 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPE-----QLVLIFAGKIMKDTDTLQMHNIK--- 69
            ::.||    ..::.|....|..:.:.|...:|.:     ::.|:..||::.  |.|.:.::|   
Yeast    81 IQAPK----FSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLH--DNLFLSDLKVTP 139

  Fly    70 DNLTVHLVIKA-PT--------RNNEQPARQPADVRQTPFGLNQFGGLAGMEALGAGSNTFMDLQ 125
            .|.|:.::||. ||        ::...||..|......|:.                     |::
Yeast   140 ANSTITVMIKPNPTISKEPEAEKSTNSPAPAPPQELTVPWD---------------------DIE 183

  Fly   126 ARMQNELLNNGDMLRSLMD 144
            |.::|...|:...:|.:|:
Yeast   184 ALLKNNFENDQAAVRQVME 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563 14/73 (19%)
hPLIC_N 9..79 CDD:176403 14/73 (19%)
STI1 322..368 CDD:128966
UBA_PLICs 501..537 CDD:270582
MDY2NP_014530.1 Get5_bdg 8..59 CDD:407090
Ubl_Rad23 74..148 CDD:340503 14/72 (19%)
Get5_C 174..212 CDD:408303 7/50 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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