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Protein Alignment Ubqn and UBI4
DIOPT Version :10
| Sequence 1: | NP_608344.1 |
Gene: | Ubqn / 32977 |
FlyBaseID: | FBgn0031057 |
Length: | 547 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_013061.1 |
Gene: | UBI4 / 850620 |
SGDID: | S000003962 |
Length: | 381 |
Species: | Saccharomyces cerevisiae |
| Alignment Length: | 77 |
Identity: | 29/77 - (37%) |
| Similarity: | 43/77 - (55%) |
Gaps: | 4/77 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 GGSKRINVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHN 67
|| :.:.|||...|. |:||:....|.:.|..:..|....|:|..||||||.::|..||..:|
Yeast 75 GG---MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Fly 68 IKDNLTVHLVIK 79
|:...|:|||::
Yeast 137 IQKESTLHLVLR 148
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Ubqn | NP_608344.1 |
Ubl_PLICs |
7..79 |
CDD:340506 |
27/72 (38%) |
| PABP-1234 |
<233..409 |
CDD:130689 |
|
| UBA_PLICs |
501..537 |
CDD:270582 |
|
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.