DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and RUB1

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_564379.2 Gene:RUB1 / 840023 AraportID:AT1G31340 Length:156 Species:Arabidopsis thaliana


Alignment Length:72 Identity:27/72 - (37%)
Similarity:41/72 - (56%) Gaps:1/72 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKDNL 72
            :.:.|||...|. |:||:....|.:.|..:..|....|:|..||||||.::|..||..:||:...
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly    73 TVHLVIK 79
            |:|||::
plant    66 TLHLVLR 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 27/70 (39%)
PABP-1234 <233..409 CDD:130689
UBA_PLICs 501..537 CDD:270582
RUB1NP_564379.2 Ubl_ubiquitin 1..76 CDD:340501 27/72 (38%)
Ubl_NEDD8 79..152 CDD:340504
Blue background indicates that the domain is not in the aligned region.

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