DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and AT5G24240

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_197812.1 Gene:AT5G24240 / 832491 AraportID:AT5G24240 Length:574 Species:Arabidopsis thaliana


Alignment Length:358 Identity:64/358 - (17%)
Similarity:125/358 - (34%) Gaps:117/358 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KKTVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGK-IMKDTDTLQMHNIKDNLTVHLVIK--- 79
            |:.:|.|..:.:| .:|...:.|..:.::  |::.|: :.::...::.:.:.|...:||||:   
plant    46 KRVMESDSIASVK-LRIQSIKGFFVKKQK--LLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSD 107

  Fly    80 -----APTRNNE------QPARQPADVRQTPFGLNQFGGLAGMEALGAGSNTFMDLQARMQNELL 133
                 ..|.:.:      :.:|....|:|.         :|..|         .:|.....:||.
plant   108 LQAISVRTVDGKEFELVVERSRNVGYVKQQ---------IASKE---------KELGIPRDHELT 154

  Fly   134 NNGDMLRSLMDNPMVQQMMNNPDTMRQLITS-------NPQMHDLMQRNPEISHMLN-------- 183
            .:|:   .|.|..::..:..|.|.:..|:.|       .|...|......:::|..|        
plant   155 LDGE---ELDDQRLITDLCQNGDNVIHLLISKSAKVRAKPVGKDFEVFIEDVNHKHNVDGRRGKN 216

  Fly   184 -----------------NPDLLRQTMELARNPSMLQELMRSHDRAMSNLE--------------- 216
                             ||::        :.|.:|:||:.|   .:..||               
plant   217 ISSEAKPKEFFVEPFIVNPEI--------KLPILLKELISS---TLEGLEKGNGPIRSSDGSGGA 270

  Fly   217 ---SVPGGYSALQRIYRDI-QEPMMNAATESFGRNPFAGLVDGGGSGAGNNPQQGTENRNP---L 274
               ..|.|:..:. :::.| :|||  |.....|: |.:  |||.|...|....:|......   |
plant   271 YFMQDPSGHKYVS-VFKPIDEEPM--AVNNPHGQ-PVS--VDGEGLKKGTQVGEGAIREVAAYIL 329

  Fly   275 PNPWGGANSGTNGTVGGSGAGNPTGDLPPNNVL 307
            ..|..|..:..:...|.:|       :||..::
plant   330 DYPMTGPRTFPHDQTGFAG-------VPPTTMV 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 12/60 (20%)
PABP-1234 <233..409 CDD:130689 19/78 (24%)
UBA_PLICs 501..537 CDD:270582
AT5G24240NP_197812.1 Ubl1_cv_Nsp3_N-like 34..105 CDD:475130 13/61 (21%)
Ubl_ubiquitin_like 111..180 CDD:340559 14/89 (16%)
PI3_PI4_kinase 266..521 CDD:395364 22/103 (21%)
Blue background indicates that the domain is not in the aligned region.

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