DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and AT7SL-1

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_192206.1 Gene:AT7SL-1 / 828121 AraportID:AT4G02970 Length:270 Species:Arabidopsis thaliana


Alignment Length:247 Identity:47/247 - (19%)
Similarity:90/247 - (36%) Gaps:60/247 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNI---- 68
            :||.:.|..... ::.:|....:.:.|..:.:.......:.:|...||.::|    .:|.|    
plant     1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALED----DLHKIDYMI 61

  Fly    69 --KDNLTVHLVIKA-PTRNNEQ--PARQPADVRQTPFGL------------------NQFGGLAG 110
              :..|.:.:...| |.::|||  .::|..|.:|...|:                  |.:..|..
plant    62 LFESRLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKITRVMARRVHNIYSSLPA 126

  Fly   111 M---EALG--------AGSNTFMDLQARMQNELLNNG-DMLRSLMDNPMVQQMMNNPDTMRQLIT 163
            .   |.||        .|..|...:|...|....... ::||. .|:|:.:::..||  |:..:.
plant   127 YSLDELLGPKYSATVAVGGRTNQVVQPTEQASTSGTAKEVLRD-SDSPVEKKIKTNP--MKFTVH 188

  Fly   164 SNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSMLQELMRSHDRAMSNL 215
            ..|...|....:.|:    |..|.:.:         :.:||::..:|...||
plant   189 VKPYQEDTRMIHVEV----NADDNVEE---------LRKELVKMQERGELNL 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 12/76 (16%)
PABP-1234 <233..409 CDD:130689
UBA_PLICs 501..537 CDD:270582
AT7SL-1NP_192206.1 ubiquitin 3..74 CDD:459726 11/74 (15%)
Blue background indicates that the domain is not in the aligned region.

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