DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and AT4G03360

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_192245.2 Gene:AT4G03360 / 827958 AraportID:AT4G03360 Length:322 Species:Arabidopsis thaliana


Alignment Length:422 Identity:81/422 - (19%)
Similarity:136/422 - (32%) Gaps:160/422 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFE----AEPEQLVLIFAGKIMKDTDTLQMHNI 68
            |.|:::...... |::|    ...|..:::.:|.|    ....:.:|||..|:::|         
plant    40 IKVIIENQSGSSFTIDV----SFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD--------- 91

  Fly    69 KDNLTVHLVIKAPTRNNEQPARQPADVRQTPFGLNQFGGLAGMEALGAGSNTFMDLQARMQNELL 133
                  |                          ||.||                       .::.
plant    92 ------H--------------------------LNMFG-----------------------CQIR 101

  Fly   134 NNGDMLRSLM--DNP---MVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTME 193
            :|..:|.|:.  |||   .|.|...:|.|     .||| :|:.:  |.:.|.:  :|.....|||
plant   102 HNSRILLSISPDDNPTQNQVPQTNQSPST-----PSNP-IHEFV--NNQDSPL--SPKSSALTME 156

  Fly   194 -LARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFAGLVDGGG 257
             .::|......|||...:.:.|..|.| .||     ..::..|..::..               .
plant   157 KFSKNQQDRPPLMRVVAKRIDNGSSRP-SYS-----LDELLAPRDSSTV---------------A 200

  Fly   258 SGAGNNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNPTGDLPPNNVLNTPAMRSLLQQMADN 322
            .|:..|..|..:||                      ..:|:..:  ..|:|          :.|:
plant   201 VGSIRNRDQEVKNR----------------------VSSPSDSV--EEVIN----------ITDS 231

  Fly   323 PAMMQNLLNAP--YTRSMMESMSQDPDMAARLLSSSPLMSNNPALQEQVRQMMPQFM-------A 378
            .||...::..|  |||.:...::.|.::       ..|......:||:....:||.|       .
plant   232 LAMKMIVMVQPYGYTRMIQVEVTADDNV-------EELRKELVKMQERGELNLPQGMYYLIHKHK 289

  Fly   379 QMQNPEVMNMLTNPDAMNAILQIQQGMEQLRS 410
            |....|..:.|||..|....:||.||..:|.|
plant   290 QAVLHEDQSFLTNGVAYGDTIQISQGYVKLTS 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 13/74 (18%)
PABP-1234 <233..409 CDD:130689 33/184 (18%)
UBA_PLICs 501..537 CDD:270582
AT4G03360NP_192245.2 rad23 40..>206 CDD:273167 48/264 (18%)
ubiquitin 42..113 CDD:459726 19/138 (14%)
Blue background indicates that the domain is not in the aligned region.

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