DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and AT4G01000

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_192009.1 Gene:AT4G01000 / 826414 AraportID:AT4G01000 Length:415 Species:Arabidopsis thaliana


Alignment Length:93 Identity:25/93 - (26%)
Similarity:35/93 - (37%) Gaps:37/93 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 RQTMELARNPSMLQELMRSHDRAMSNLESVPGGY-----SALQRIYRDIQEPMMNAATESF---- 244
            ::..|..:.|:.||.|             :.|||     ||       |.:|   .||.:.    
plant    37 QRIFEQTKIPTHLQRL-------------ISGGYQISDGSA-------ISQP---DATVNLVLSL 78

  Fly   245 --GRNPFAGLVDGGGSGAGNNPQQGTEN 270
              |:..|..|:.|||..||   |:.|.|
plant    79 RGGKGGFGSLLRGGGMKAG---QKKTNN 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506
PABP-1234 <233..409 CDD:130689 14/44 (32%)
UBA_PLICs 501..537 CDD:270582
AT4G01000NP_192009.1 Ubl1_cv_Nsp3_N-like 10..156 CDD:475130 25/93 (27%)
SDE2_2C 351..402 CDD:463835
Blue background indicates that the domain is not in the aligned region.

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