DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Ubl4b

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_080537.1 Gene:Ubl4b / 67591 MGIID:1914841 Length:188 Species:Mus musculus


Alignment Length:142 Identity:32/142 - (22%)
Similarity:60/142 - (42%) Gaps:22/142 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKDNLTVHLVIKAPTRNN 85
            :::|.....:...|.||:|..:...||..|:|.|:::.|...|..::|..|.:::::::.|    
Mouse    14 SLKVSGKESVATLKKLVSQHLQVPEEQQHLLFRGQLLADDKYLSDYSIGPNASINVIMRPP---- 74

  Fly    86 EQPARQPADVRQTPFGL-------NQFGGLAGMEALGAGSNTFM--DLQARMQNELLNNGDMLRS 141
            |..|.......| |..|       ..||.......||     |:  :.:.|:|...|   :.|..
Mouse    75 EDAALDKTHQTQ-PLWLQLGQVLDKHFGAKDAKTVLG-----FLRQEHEERLQRLSL---EALEQ 130

  Fly   142 LMDNPMVQQMMN 153
            |:...:.||.::
Mouse   131 LVGQLLAQQQLD 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 14/57 (25%)
PABP-1234 <233..409 CDD:130689
UBA_PLICs 501..537 CDD:270582
Ubl4bNP_080537.1 Ubl1_cv_Nsp3_N-like 1..72 CDD:475130 14/57 (25%)
Tugs 89..135 CDD:465528 11/53 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..188
Blue background indicates that the domain is not in the aligned region.

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