DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and RAD23A

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_024307399.1 Gene:RAD23A / 5886 HGNCID:9812 Length:382 Species:Homo sapiens


Alignment Length:386 Identity:77/386 - (19%)
Similarity:131/386 - (33%) Gaps:102/386 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQ-------LVLIFAGKIMKDTDTLQM 65
            :.:.:||.:.:. .:.::.|..:|..|    :|.|||..:       ..||:||||:.|...::.
Human     3 VTITLKTLQQQTFKIRMEPDETVKVLK----EKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRD 63

  Fly    66 HNIKD-NLTVHLVIK---------------------------APT----------RNNEQPARQ- 91
            :.|.: |..|.:|.|                           |||          |.::.|:.: 
Human    64 YRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEES 128

  Fly    92 -PADVRQTPFGLNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQMMNNP 155
             |....::..|.....|.:|.|...|.:.........|..|:::.|.....::  ..::...|||
Human   129 APTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVV--AALRASYNNP 191

  Fly   156 D-TMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSMLQ------ELMRSHDRA-- 211
            . .:..|:|..|...:....:.:.|.:...|  ..:....|...|.||      ...||..|:  
Human   192 HRAVEYLLTGIPGSPEPEHGSVQESQVSEQP--ATEAGGCAHAASALQVPDSHYTPPRSAPRSPA 254

  Fly   212 ---------MSNLE--SVPGGYSALQRIYRDIQEPMMNAATESFGRNPFAGLVDGGGSGAG---- 261
                     .|..|  .||.|.:.:..          :||.:|  ..|.|.......:|.|    
Human   255 WCLTAPLPTTSRREPPGVPAGPAPVPE----------HAAGDS--AEPCAAARPAPAAGPGEPSA 307

  Fly   262 ---NNPQQGTENRNPLPNPWGGANSGTNGTVGGSGA----GNPTGDLPPNNVLNTPAMRSL 315
               |.|..|..:.:....|||   :|.:...||.|.    |.|..:|.|.:.....:.|.:
Human   308 FTANQPAPGAVHPDAERAPWG---AGGHLRCGGGGGRHRRGGPADELHPGDAAGERSYREV 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563 20/78 (26%)
hPLIC_N 9..79 CDD:176403 20/78 (26%)
STI1 322..368 CDD:128966
UBA_PLICs 501..537 CDD:270582
RAD23AXP_024307399.1 UBQ 3..>228 CDD:333228 43/232 (19%)
DNA_pol3_gamma3 <81..378 CDD:331207 56/304 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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