DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Ubqln1

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_081118.4 Gene:Ubqln1 / 56085 MGIID:1860276 Length:582 Species:Mus musculus


Alignment Length:582 Identity:286/582 - (49%)
Similarity:383/582 - (65%) Gaps:66/582 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AEGG---SKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTL 63
            |:||   .|.:.|.|||||:|:...|.|:|.::.||..::::|::..:||||||||||:||.|||
Mouse    18 ADGGPAEPKIMKVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHIDQLVLIFAGKILKDQDTL 82

  Fly    64 QMHNIKDNLTVHLVIKAPTRNNEQPARQ-----------PA--------DVRQTPFGLNQFGGLA 109
            ..|.|.|.||||||||...|..:..|:|           ||        ....:.||:...||||
Mouse    83 SQHGIHDGLTVHLVIKTQNRPQDNSAQQTNAPGSTVTSSPAPDSNPTSGSAANSSFGVGGLGGLA 147

  Fly   110 GMEALGAGSNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNPQMHDLMQR 174
            |:.:||..:..|.:||::||.:||:|.:|:..:|:||.||.|::|||.|||||.:||||..|:||
Mouse   148 GLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQR 212

  Fly   175 NPEISHMLNNPDLLRQTMELARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNA 239
            ||||||||||||::|||:||||||:|:||:||:.|||:|||||:||||:||:|:|.||||||:||
Mouse   213 NPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLNA 277

  Fly   240 ATESFGRNPFAGLVDGGGSGAGNNPQQGTENRNPLPNPWG-------------GANSGTNGTVGG 291
            |.|.||.||||.||....|..|..|.: ||||:||||||.             |:.:.|..|.||
Mouse   278 AQEQFGGNPFASLVSSSSSAEGTQPSR-TENRDPLPNPWAPQTSQSSPASGTTGSTTNTMSTSGG 341

  Fly   292 SGAGNPTG------DLPPN---NVLNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPD 347
            :....|.|      .|.|.   ::.|||.|:|||||:.:||.:|||:|:|||.|||::|:||:||
Mouse   342 TATSTPAGQSTSGPSLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMLQSLSQNPD 406

  Fly   348 MAARLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQIQQGMEQLRSAA 412
            :||:::.::||.:.||.||||:||.:|.|:.|||||:.::.::||.||.|:||||||::.|.:.|
Mouse   407 LAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEA 471

  Fly   413 PGLVGTLGIPPPPPGAGTGTNPASGDGSGGNSGASTNNVSPSSGLNAGTGTPNLAPGGGPNAQLF 477
            |||     ||...||...|       .|||:||.:..:.:||...|...||..  ||       .
Mouse   472 PGL-----IPGFTPGLAAG-------NSGGSSGTNAPSTAPSEDTNPQGGTAE--PG-------H 515

  Fly   478 NDFMMRMLNGMSNNADNTQPPEVRYQSQLEQLNAMGFVNRDANLQALIATFGDINAAVERLL 539
            ..|:.:||..::......|.||||:|.|||||:||||:||:|||||||||.||||||:||||
Mouse   516 QQFIQQMLQALAGVNPQLQSPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563 37/69 (54%)
hPLIC_N 9..79 CDD:176403 37/69 (54%)
STI1 322..368 CDD:128966 25/45 (56%)
UBA_PLICs 501..537 CDD:270582 28/35 (80%)
Ubqln1NP_081118.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 3/6 (50%)
UBQ 28..98 CDD:214563 37/69 (54%)
hPLIC_N 28..98 CDD:176403 37/69 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 103..136 4/32 (13%)
Interaction with UBXN4. /evidence=ECO:0000250|UniProtKB:Q9UMX0 169..422 137/253 (54%)
STI1 173..210 CDD:128966 20/36 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..365 27/79 (34%)
STI1 384..416 CDD:128966 17/31 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 478..513 13/43 (30%)
UBA_PLICs 539..578 CDD:270582 32/39 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850645
Domainoid 1 1.000 399 1.000 Domainoid score I741
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H137258
Inparanoid 1 1.050 531 1.000 Inparanoid score I1200
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54270
OrthoDB 1 1.010 - - D1553668at2759
OrthoFinder 1 1.000 - - FOG0001496
OrthoInspector 1 1.000 - - otm42793
orthoMCL 1 0.900 - - OOG6_100933
Panther 1 1.100 - - O PTHR10677
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2096
SonicParanoid 1 1.000 - - X761
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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