DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and CG10694

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster


Alignment Length:287 Identity:60/287 - (20%)
Similarity:101/287 - (35%) Gaps:101/287 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DKKTV--EVDEDSGIKDFKILVAQKFEAEP------EQLVLIFAGKIMKDTDTLQMHNIKDNLTV 74
            |::|:  |::|...::..|    ||....|      |.|.||::|:||:|...|..:.|.::..:
  Fly     9 DQRTITLEMNESQEVRALK----QKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAEDKII 69

  Fly    75 HLVIKAPTRNNEQPARQPADVRQTPFGLNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNGDML 139
            .|:.|... :...|..:   |..||             .|.||.|            :|...|::
  Fly    70 VLMGKKKV-DKSSPEEK---VAPTP-------------PLAAGPN------------VLRTEDVV 105

  Fly   140 RSLMDNPM-VQQMM-----------------NNPD-TMRQLITSNPQ------------------ 167
            .||..|.. |..:|                 |:|: .:..||...||                  
  Fly   106 PSLAPNDQWVSDLMSMGYGEEEVRSALRASFNHPERAIEYLINGIPQEVVSEQGLAAIPSVQTSD 170

  Fly   168 -------------MHDLMQRNPEISHMLNNPDLLRQTMELARNPSMLQELMRSHDRAMSNLESVP 219
                         |.:::.:|||:.|.|.|  .|.:|     :|:..:...|:.:..|:   .:.
  Fly   171 QLQQLMADLNITRMREMINQNPELIHRLMN--RLAET-----DPATFEVFQRNQEELMN---MIS 225

  Fly   220 GGYSALQRIYRDIQEPMMNAATESFGR 246
            ||.|........:|..:....|.:.||
  Fly   226 GGASRTPNEIEHLQITLTAEETAAVGR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 19/68 (28%)
PABP-1234 <233..409 CDD:130689 4/14 (29%)
UBA_PLICs 501..537 CDD:270582
CG10694NP_651212.1 rad23 1..284 CDD:273167 60/287 (21%)
Blue background indicates that the domain is not in the aligned region.

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