DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and zgc:56596

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_956594.1 Gene:zgc:56596 / 393270 ZFINID:ZDB-GENE-040426-1089 Length:157 Species:Danio rerio


Alignment Length:166 Identity:36/166 - (21%)
Similarity:67/166 - (40%) Gaps:39/166 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKDNLTV 74
            :.||..:.|: .|:|.|:..:...|.||:::......|..|::.||.:.|...|..::|.....:
Zfish     3 LTVKPLQGKECNVQVTENEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDYSIGPEAKL 67

  Fly    75 HLVIKAPTRNNEQPARQPADVRQTPFGLNQFGGLAGMEALG---AGSNTFMDLQ----------- 125
            :||::            ||..|.:        |..|..:..   .||..:..|.           
Zfish    68 NLVVR------------PAGERSS--------GAVGTSSANNDKGGSGVWQLLSTVLAKHFSPAD 112

  Fly   126 -ARMQNELLNNGD-MLR--SLMDNPMVQQMMNNPDT 157
             |::|.:|:.:.: .||  ||.|...:...:.:|:|
Zfish   113 AAKVQEQLIKDYERSLRQLSLDDIERLASRLLHPET 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 18/68 (26%)
PABP-1234 <233..409 CDD:130689
UBA_PLICs 501..537 CDD:270582
zgc:56596NP_956594.1 Ubl_UBL4A_like 1..72 CDD:340505 18/68 (26%)
Tugs 97..143 CDD:465528 9/45 (20%)
Blue background indicates that the domain is not in the aligned region.

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