Protein Alignment Ubqn and Rad23a

DIOPT Version :9

• Sequence 1: NP_001285457.1
• Gene: Ubqn / 32977
• FlyBaseID: FBgn0031057
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: XP_006255338.1
• Gene: Rad23a / 361381
• RGDID: 1309899
• Length: 363
• Species: Rattus norvegicus
• Alignment Length: 326
• Identity: 65/326 - (19%)
• Similarity: 112/326 - (34%)
• Gaps: 112/326 - (34%)

  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQ-------LVLIFAGKIMKDTDTLQM 65
            :.:.:||.:.:. .:.::.|..:|..|    :|.|||..:       ..||:||||:.|...::.
  Rat     3 VTITLKTLQQQTFKIRMEPDETVKVLK----EKIEAEKGRDAFPVAGQKLIYAGKILSDDIPIKE 63

  Fly    66 HNIKD-NLTVHLVIKA------PTRNNEQPARQPADVRQTPF----------------------- 100
            ::|.: |..|.:|.||      |......|...|..  .|||
  Rat    64 YHIDEKNFVVVMVTKAKAGQGTPAPPEASPTAAPEP--STPFPPAPASGMSHPPPSNREDKSSSE 126

  Fly   101 ------------GLNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNG-------DMLRSLMDNP 146
                        |.....|.:|.|...|.:.........|..|:::.|       ..||:..:||
  Rat   127 ESATTTSPESISGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNP 191

  Fly   147 --------------------MVQQMM-----------NNPDTMRQLITSNPQ---MHDLMQRNPE 177
                                .||:..           .||   .:.:...||   |..::|:||.
  Rat   192 HRAVEYLLTGIPGSPEPEHGSVQESQAPEQPATEAAGENP---LEFLRDQPQFQNMRQVIQQNPA 253

  Fly   178 ISHMLNNPDLLRQTMELARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDI-----QEPMM 237
            :.     |.||:|..:  .||.:||::.|..::.:..|...||..:.:..:..::     :.|.|
  Rat   254 LL-----PALLQQLGQ--ENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGALGEEAPQM 311

  Fly   238 N 238
            |
  Rat   312 N 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubqn	NP_001285457.1	UBQ	9..79	CDD:214563	20/78 (26%)
		hPLIC_N	9..79	CDD:176403	20/78 (26%)
		STI1	322..368	CDD:128966
		UBA_PLICs	501..537	CDD:270582
Rad23a	XP_006255338.1	rad23	3..361	CDD:273167	65/326 (20%)
		RAD23_N	3..80	CDD:176400	21/80 (26%)
		UBA1_Rad23	162..201	CDD:270560	7/38 (18%)
		XPC-binding	232..287	CDD:286376	16/61 (26%)
		UBA2_HR23A	319..359	CDD:270610

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900