Protein Alignment Ubqn and Ubqln3

DIOPT Version :10

• Sequence 1: NP_608344.1
• Gene: Ubqn / 32977
• FlyBaseID: FBgn0031057
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: XP_017444687.1
• Gene: Ubqln3 / 308905
• RGDID: 1304920
• Length: 678
• Species: Rattus norvegicus
• Alignment Length: 669
• Identity: 214/669 - (31%)
• Similarity: 305/669 - (45%)
• Gaps: 171/669 - (25%)

  Fly     6 SKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKD 70
            |:.|.|.|||||||:...|.:...|:..|..::.:|:|.|.||||||||||:||.|:|....::|
  Rat    42 SQLIRVTVKTPKDKEDFSVVDTCTIRQLKEKISHRFKAHPNQLVLIFAGKILKDPDSLAQCGVRD 106

  Fly    71 NLTVHLVIKAP--TRNNEQPARQPADVRQTPFGLNQ--------------FGGLAGMEALGAGSN 119
            .||||||||..  |...|.||...:.....|..|.|              .|.|.|:..||..|.
  Rat   107 GLTVHLVIKMQRRTTGTECPAPPVSTPGPNPLELPQPNSAYPVDGSPSFSLGVLTGLSGLGLTSG 171

  Fly   120 TFMDLQARMQNELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNN 184
            :|.|....:..:.::..:::..|:|:|.:|.:::|...||||:..||.|..|:|:||||.|:|||
  Rat   172 SFSDQPGSLMWQHMSVPELVAQLVDDPFIQGLLSNTGLMRQLVLDNPHMQQLIQQNPEIGHILNN 236

  Fly   185 PDLLRQTMELARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPF 249
            |:::|||||..|||||:||:|||.|||:|||||:||||:.|:.:|.||.:||:||..|.||.|||
  Rat   237 PEIMRQTMEFLRNPSMMQEMMRSQDRALSNLESIPGGYNVLRTMYTDIMDPMLNAVQEQFGGNPF 301

  Fly   250 AGLVDGGGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNPTGDLPPNNVLN------ 308
            |.......:...:.|.: |||.:||||||    :.|.| |.||..|...||...:...|
  Rat   302 ATATTASTTTTSSQPSR-TENCDPLPNPW----TSTCG-VSGSRQGRQPGDQDTSESRNRLPSFL 360

  Fly   309 ---------------TPAMRSLLQQMADNPAMMQ-----------NLLNAP-------------- 333
                           :.|:.|.||.....|:..|           ||..:|
  Rat   361 GNIGLFDYLQQLHETSQALGSYLQGTVPTPSSSQETPLSGNRVPPNLPPSPKPGSGQPLPKDSVA 425

  Fly   334 ---------YTRSMMES-------------------------MSQDPDMAAR---------LLSS 355
                     :.|...|:                         .||..|.|.|         |:|.
  Rat   426 IKGKSSCPAFLRHSSENSTGQGGSLHDSGKSSTGPSTGLPNLTSQIGDNANRSPFVSTPSSLISP 490

  Fly   356 SP--------------------LMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQ 400
            :|                    |.:..|.:|.::.|.:|..:      .:...:|||..|.|:||
  Rat   491 TPGAPESPWLPPTGYPRSLRSALTNQVPRMQNELHQQLPLLL------HLQTAMTNPRVMQALLQ 549

  Fly   401 IQQGMEQLRSAAP-----------GLVGTLGIPPPPPGAGTGTNPASGDGSGGNSGASTNNVSPS 454
            |:||::.|.:.||           ||.|.:|......|.....:|               ..:|:
  Rat   550 IEQGLQILATEAPRLLLWFMPCLAGLSGVIGGTESREGVVMSEDP---------------RPTPT 599

  Fly   455 SGLNAGTGTPNLAPGGGPNAQLFNDFMMRMLNGMSNNADNTQPPEVRYQSQLEQLNAMGFVNRDA 519
            |.::...|:..|.....|        .:::|..:::........|..::.|||||.||||:|.:|
  Rat   600 SQISLVQGSAELGFHSSP--------FLQVLQALASTNPQQLQLEAHFRVQLEQLRAMGFLNLEA 656

  Fly   520 NLQALIATFGDINAAVERL 538
            ||||||||.||::||||:|
  Rat   657 NLQALIATGGDVDAAVEKL 675

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubqn	NP_608344.1	Ubl_PLICs	7..79	CDD:340506	36/71 (51%)
		PABP-1234	<233..409	CDD:130689	64/284 (23%)
		UBA_PLICs	501..537	CDD:270582	24/35 (69%)
Ubqln3	XP_017444687.1	Ubl_PLICs	43..115	CDD:340506	36/71 (51%)
		UBI4	65..>176	CDD:444084	42/110 (38%)
		STI1	217..>258	CDD:450205	26/40 (65%)
		UBA_PLICs	638..675	CDD:270582	25/36 (69%)