DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Oasl

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_001009681.1 Gene:Oasl / 304545 RGDID:1308586 Length:512 Species:Rattus norvegicus


Alignment Length:95 Identity:23/95 - (24%)
Similarity:41/95 - (43%) Gaps:24/95 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKRINVVVKTPKDKKTVEVDEDSGIK-------DFKILVAQKFE----AEPEQLVLIFAGKIMKD 59
            |..|.|.||.|          |.|..       ||.:.:.|:.|    .:.::..|.|.|::::|
  Rat   428 SPEIQVFVKNP----------DGGSHAYAIHPLDFVLSLKQQIEDRQGLQSQEQQLEFQGRVLED 482

  Fly    60 TDTLQMHNIKDNLTVHLVIKAPTRNNEQPA 89
            ....:.:.|:|::|:.|..|   |..:.|:
  Rat   483 WFDFKSYGIQDSITIILSRK---REGKAPS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 19/82 (23%)
PABP-1234 <233..409 CDD:130689
UBA_PLICs 501..537 CDD:270582
OaslNP_001009681.1 NT_2-5OAS_ClassI-CCAase 29..209 CDD:143390
OAS1_C 167..348 CDD:463087
Ubl1_OASL 351..424 CDD:340509
Ubl1_cv_Nsp3_N-like 430..501 CDD:475130 19/80 (24%)
Blue background indicates that the domain is not in the aligned region.

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