DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Oas1d

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_038945418.1 Gene:Oas1d / 304508 RGDID:1310349 Length:389 Species:Rattus norvegicus


Alignment Length:81 Identity:16/81 - (19%)
Similarity:35/81 - (43%) Gaps:17/81 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EGGSKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFE--AEPEQLVLIFAGKIMKDTD---- 61
            :..|:.:::.:.:|:.::.||.|....   :.:|.|.::.  .:|.....|:|..|.:.|:    
  Rat   127 QANSRSLSIKLSSPQLQQEVEFDVQPA---YDVLYAWRYNKYLDPRIYNKIYASLIRESTNLDKE 188

  Fly    62 --------TLQMHNIK 69
                    .||.|.:|
  Rat   189 GEFSVCFTELQQHFLK 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563 15/75 (20%)
hPLIC_N 9..79 CDD:176403 15/75 (20%)
STI1 322..368 CDD:128966
UBA_PLICs 501..537 CDD:270582
Oas1dXP_038945418.1 NT_2-5OAS_ClassI-CCAase 27..167 CDD:143390 7/42 (17%)
OAS1_C 173..354 CDD:402171 8/32 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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