DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and AT1G53980

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_001319221.1 Gene:AT1G53980 / 28717352 AraportID:AT1G53980 Length:91 Species:Arabidopsis thaliana


Alignment Length:71 Identity:20/71 - (28%)
Similarity:31/71 - (43%) Gaps:20/71 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEP-EQLVL------------IFAGKIMKD 59
            :.:::||.|.|. .:|:::.|...|.||      .||| .||||            ||...:...
plant     1 MKILIKTEKGKTINLELEDSSETIDIKI------HAEPTRQLVLGLGQGPQGEMMSIFVSTLKGK 59

  Fly    60 TDTLQM 65
            |..|::
plant    60 TFNLEV 65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 20/71 (28%)
PABP-1234 <233..409 CDD:130689
UBA_PLICs 501..537 CDD:270582
AT1G53980NP_001319221.1 Ubl1_cv_Nsp3_N-like 49..>87 CDD:475130 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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