DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Zfand4

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_038963095.1 Gene:Zfand4 / 286998 RGDID:628707 Length:815 Species:Rattus norvegicus


Alignment Length:577 Identity:118/577 - (20%)
Similarity:178/577 - (30%) Gaps:216/577 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKRINVVVKTPKDKKTVEVDEDS-GIKDFKI------------LVAQKFE--AEPEQLVLIFAGK 55
            |:||..|......|:....:||: |...||:            |....||  ..|.:.|:...||
  Rat    36 SRRIRKVKVMDNRKEPPFFNEDNVGPFYFKLPFYDPMELFIETLTGTCFELRVSPFEAVISVKGK 100

  Fly    56 I-------------------MKDTDTLQMHNIKDNLTVHLVI----------KAPTRNNEQPARQ 91
            |                   ::|...|..:||.:..|:.||:          |.|.   |.|.|:
  Rat   101 IQRLEGIPICQQHLIWNNMELEDDYCLNDYNISEGCTLKLVLAMRGGPISTRKVPV---EDPLRE 162

  Fly    92 PADV---------------RQTPFGLNQFGG-LAGMEALGAGSNTFMDLQARMQNELLNNGDMLR 140
            .|:.               :|..|.:.:.|. |.....:..|..|...|     :|.|:.|.:..
  Rat   163 LAEYMDSSRDEVWEKTSCNKQVTFLVYREGDQLNFFRVVDRGDGTLTPL-----SESLSGGSVYN 222

  Fly   141 SLMD-------NPMVQQMMNNPDTMR--QLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELAR 196
            ...|       :|..||::.|..||.  :|:.:..:..:|.::..::..:...|       .:|.
  Rat   223 LYTDEDEETEPSPSGQQIIENSITMNKMKLLKAKMENMNLSKKPKKVVKVKPRP-------PIAP 280

  Fly   197 NPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFAGLVDGGGSGAG 261
            .||........| |.:..|..:  |.|.|         |..||......||              
  Rat   281 RPSSSSAAAARH-RLLRVLPHI--GQSCL---------PSGNAYVPETSRN-------------- 319

  Fly   262 NNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNPTGDLPPNNVLNTPAMRSLLQQMADNPAMM 326
                                       .|.|.|.....|.|      .|::||.|  :.|:....
  Rat   320 ---------------------------AGTSSAAQAPADRP------MPSLRSEL--LKDDGNWE 349

  Fly   327 QNLLN---------APYTRSMMESMSQDPDMAARLLSSSP---------LMSNNPALQEQVRQMM 373
            :|:|:         ...|...:|:..:.||....|.||.|         |.|||   :|.| .:.
  Rat   350 RNMLSHSTSSIRLLPQLTHLDLENDKELPDSVLHLGSSLPRRTKHLSGNLSSNN---EEDV-VLF 410

  Fly   374 PQFMAQMQNPEVMNMLTNPDAMNAILQIQQGMEQLRSAAPGLVGTLGIPPPPPGAGTGTNPASG- 437
            |:     ....|.:.|..|:                      ||    |..|...|.|...:|| 
  Rat   411 PR-----SEECVADELLLPE----------------------VG----PFAPFAEGNGAEQSSGV 444

  Fly   438 DGSGGNSGASTNNVSPSSGLNAGTGTPNLAPGGGPNAQLFNDFMMRMLNGMSNNADN 494
            :|.|        .|:|...|..|       .||...|:.....|.|:|:  |:..||
  Rat   445 EGLG--------KVTPEFPLTKG-------DGGLRAAEQPLSHMARVLS--SDPGDN 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 24/115 (21%)
PABP-1234 <233..409 CDD:130689 35/193 (18%)
UBA_PLICs 501..537 CDD:270582
Zfand4XP_038963095.1 Ubl_ZFAND4 72..145 CDD:340500 15/72 (21%)
Blue background indicates that the domain is not in the aligned region.

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