Protein Alignment Ubqn and dsk2

DIOPT Version :10

• Sequence 1: NP_608344.1
• Gene: Ubqn / 32977
• FlyBaseID: FBgn0031057
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_594159.1
• Gene: dsk2 / 2542667
• PomBaseID: SPAC26A3.16
• Length: 354
• Species: Schizosaccharomyces pombe
• Alignment Length: 560
• Identity: 130/560 - (23%)
• Similarity: 196/560 - (35%)
• Gaps: 239/560 - (42%)

  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKDNL 72
            |::.:|...|:| .|.||.:|.:...|..:|...:.|.|:..||:||:::||.::|:.:.|:|..
pombe     4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGH 68

  Fly    73 TVHLVIKAPTRNNEQPARQPADVRQTPFGLNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNGD 137
            ::|||
pombe    69 SIHLV------------------------------------------------------------ 73

  Fly   138 MLRSLMDNPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSMLQ 202
              ::|..|| .....|..|..:|:.|           |.:.....|||
pombe    74 --KTLGQNP-AAAATNVSDRTQQVPT-----------NIQAGQGANNP----------------- 107

  Fly   203 ELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFAGLVDGGGSGAGNNPQQG 267
                     ::||.|..         |.....||.:|:  .||.||
pombe   108 ---------LANLTSAR---------YAGFNIPMPSAS--MFGPNP------------------- 133

  Fly   268 TENRNPLPNPWGGANSGTNGTVGGSGAGNPTGDLPPNNVLNTPAMRSLLQQMADNPAMMQNLLNA 332
               .||:|                    ..|.:|.  |:|:.|.::|.:.:|..||.|:..::|
pombe   134 ---ENPVP--------------------PSTEELA--NMLSNPMVQSSINEMFSNPQMLDMIIN- 172

  Fly   333 PYTRSMMESMSQDPDMAARLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNA 397
                                  |||.:.|.|   ..||||       ||:||....:|:||.|..
pombe   173 ----------------------SSPHLRNAP---PYVRQM-------MQSPEFRRAMTDPDTMRQ 205

  Fly   398 ILQIQQ-----GMEQLRSAAPGL----VGTLGIPPPPPGAGTGTNPASGDGSGGNSGAS------ 447
            :.|:.|     |::.:.....||    :|.||      |||.|....:.:.:.|.:||:
pombe   206 MAQLHQQMGAAGIDPMSLMGGGLGGAGLGGLG------GAGLGGFGGANNATAGIAGAAPVDQTA 264

  Fly   448 --------TNNVSPSSGLNAGTGTPNLAPG-GG---PNAQLFNDFMMRMLNGMSNNADNTQPPEV 500
                    .||:. .:|..||.|...|..| ||   |.|.                |.:|:|||.
pombe   265 AANTIQNLLNNLG-GAGFGAGLGDAGLGAGLGGAASPPAP----------------AQDTRPPEE 312

  Fly   501 RYQSQLEQLNAMGFVNRDANLQALIATFGDINAAVERLLS 540
            ||..||.|||.||||:.:.|:|||..:.|::..|:|.|||
pombe   313 RYAEQLSQLNEMGFVDFERNVQALRRSGGNVQGAIESLLS 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubqn	NP_608344.1	Ubl_PLICs	7..79	CDD:340506	24/70 (34%)
		PABP-1234	<233..409	CDD:130689	41/180 (23%)
		UBA_PLICs	501..537	CDD:270582	17/35 (49%)
dsk2	NP_594159.1	rad23	4..>169	CDD:273167	59/319 (18%)
		Ubl_Dsk2p_like	4..74	CDD:340523	24/131 (18%)
		UBA_Dsk2p_like	310..351	CDD:270509	20/40 (50%)