DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Oas1b

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_653353.2 Gene:Oas1b / 246268 RGDID:708393 Length:379 Species:Rattus norvegicus


Alignment Length:66 Identity:16/66 - (24%)
Similarity:22/66 - (33%) Gaps:19/66 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 QNPEVMNMLTNPDAMNAILQIQQGMEQLRSAAPGLVGTLGIPPPPPGAGTGTNPASGDGSGGNSG 445
            |:|||...|               ..||:...|.::.    |..|.|...|:||.......|.:.
  Rat   280 QHPEVSKYL---------------RRQLKKPRPVILD----PANPTGNIAGSNPKGWRRLAGEAA 325

  Fly   446 A 446
            |
  Rat   326 A 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563
hPLIC_N 9..79 CDD:176403
STI1 322..368 CDD:128966
UBA_PLICs 501..537 CDD:270582
Oas1bNP_653353.2 NT_2-5OAS_ClassI-CCAase 27..176 CDD:143390
OAS1_C 164..347 CDD:287404 16/66 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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