DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubqn and Oasl1

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_001346874.1 Gene:Oasl1 / 231655 MGIID:2180849 Length:511 Species:Mus musculus


Alignment Length:75 Identity:19/75 - (25%)
Similarity:33/75 - (44%) Gaps:7/75 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEP----EQLVLIFAGKIMKDTDTLQMH 66
            |..|.|.||.|..:........   .|:.:.:.|:.|...    ::..|.|.|.|::|....:.:
Mouse   427 SPEIQVFVKNPDGRSHAYAIHP---LDYVLNLKQQIEDRQGLRCQEQRLEFQGHILEDWFDFKSY 488

  Fly    67 NIKDNLTVHL 76
            .|:|::||.|
Mouse   489 GIQDSVTVIL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563 18/72 (25%)
hPLIC_N 9..79 CDD:176403 18/72 (25%)
STI1 322..368 CDD:128966
UBA_PLICs 501..537 CDD:270582
Oasl1NP_001346874.1 NT_2-5OAS_ClassI-CCAase 29..208 CDD:143390
OAS1_C 165..347 CDD:313619
UBQ 350..429 CDD:320785 1/1 (100%)
ubiquitin 432..498 CDD:306702 16/68 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.