DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Rad23a

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_001365823.1 Gene:Rad23a / 19358 MGIID:105126 Length:367 Species:Mus musculus


Alignment Length:440 Identity:86/440 - (19%)
Similarity:144/440 - (32%) Gaps:153/440 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQ-------LVLIFAGKIMKDTDTLQM 65
            :.:.:||.:.:. .:.::.|..:|..|    :|.|||..:       ..||:||||:.|...::.
Mouse     3 VTITLKTLQQQTFKIRMEPDETVKVLK----EKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIKE 63

  Fly    66 HNIKD-NLTVHLVIKA------PTRNNEQPARQPADVRQTPFGLNQFGGLAGMEALGAGSNTFMD 123
            ::|.: |..|.:|.||      |......|...|..  .|||                       
Mouse    64 YHIDEKNFVVVMVTKAKAGQGIPAPPEASPTAVPEP--STPF----------------------- 103

  Fly   124 LQARMQNELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPE-ISHML----- 182
                        ..:|.|.|.:|        |.|.|:  ..:|........:|| ||..:     
Mouse   104 ------------PPVLASGMSHP--------PPTSRE--DKSPSEESTTTTSPESISGSVPSSGS 146

  Fly   183 --NNPDLLRQTMELARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFG 245
              ...|.....:..:...:||.|:|..             ||.         :|.::.|...|: 
Mouse   147 SGREEDAASTLVTGSEYETMLTEIMSM-------------GYE---------RERVVAALRASY- 188

  Fly   246 RNPFAGLVDGGGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNPT-GDLPPNNVLNT 309
                            |||.:..|..                ..|..|:..|. |.:..:.....
Mouse   189 ----------------NNPHRAVEYL----------------LTGIPGSPEPEHGSVQESQAPEQ 221

  Fly   310 PAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPDMAARLLSSSPLMSNNPALQEQVRQMMP 374
            ||    .:...:||  ::.|.:.|..::|.:.:.|:|.:...||..  |...||    |:.|:.|
Mouse   222 PA----TEAAGENP--LEFLRDQPQFQNMRQVIQQNPALLPALLQQ--LGQENP----QLLQVRP 274

  Fly   375 QFMAQMQNPEVMNMLTNPDAMNAILQIQQGMEQLRSAAPGLVGTLGIPPP 424
            :.:::.|. :.:.||..|....|.:          |...|.||.:|...|
Mouse   275 RQISRHQE-QFIQMLNEPPGELADI----------SDVEGEVGAIGEEAP 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 20/78 (26%)
PABP-1234 <233..409 CDD:130689 33/176 (19%)
UBA_PLICs 501..537 CDD:270582
Rad23aNP_001365823.1 rad23 3..365 CDD:273167 86/440 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..160 19/123 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..227 6/29 (21%)
Blue background indicates that the domain is not in the aligned region.

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