Protein Alignment Ubqn and rad-23

DIOPT Version :10

• Sequence 1: NP_608344.1
• Gene: Ubqn / 32977
• FlyBaseID: FBgn0031057
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_496488.2
• Gene: rad-23 / 174785
• WormBaseID: WBGene00013924
• Length: 323
• Species: Caenorhabditis elegans
• Alignment Length: 303
• Identity: 68/303 - (22%)
• Similarity: 110/303 - (36%)
• Gaps: 100/303 - (33%)

  Fly    22 VEVDEDSGIKDFKILVAQK--FEAEPEQLVLIFAGKIMKDT------------------DTLQMH 66
            :|::||..|.:.|.|||.:  .:..||...||:.|||:.|:                  ...::.
 Worm    17 LELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGEVGFDSSKFVVVMLSKRKVT 81

  Fly    67 NIKDNLTV-----HLVIKAPTRNNEQPARQPADVRQTPFGLNQFGGLAGMEAL------------ 114
            .:..:.||     .:.:.|...:|..||...|.....|         |..|||
 Worm    82 EVAPSSTVATAAEPVPVAAAPASNPAPAADVAPEAAAP---------AEAEALTDEQEENVLAIT 137

  Fly   115 GAG---SNTFMDLQARMQN-----ELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNPQMH-D 170
            |.|   ..|...|:|...|     |.|.||     |.|:...|:    ||.       .|:.: |
 Worm   138 GMGYDREQTIAALRAAFWNPDRAVEFLLNG-----LPDDAADQE----PDL-------GPEQNID 186

  Fly   171 LMQR--NPEISHMLNNPDLLRQTMELARNPSM----LQELMRSHDRAMSNLESVPGGYSALQRIY 229
            .:..  |.:::.:.|.|.|......:.:||.|    ||:|...:.|.:..:::       .|:.:
 Worm   187 NVDEDGNDDLNMLANMPQLAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQN-------NQQAF 244

  Fly   230 RDIQEPMMNAATESFGRNPFAGLVDGGGSGAGNNPQQGTENRN 272
            .|    ::|            |...|.|:.|||.|::.|..|:
 Worm   245 MD----LLN------------GGAQGAGAAAGNAPERNTPRRH 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubqn	NP_608344.1	Ubl_PLICs	7..79	CDD:340506	18/81 (22%)
		PABP-1234	<233..409	CDD:130689	10/40 (25%)
		UBA_PLICs	501..537	CDD:270582
rad-23	NP_496488.2	rad23	3..319	CDD:273167	68/303 (22%)