DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and C16C8.11

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_494548.1 Gene:C16C8.11 / 173690 WormBaseID:WBGene00015849 Length:214 Species:Caenorhabditis elegans


Alignment Length:104 Identity:24/104 - (23%)
Similarity:43/104 - (41%) Gaps:12/104 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 MADNPAMMQNLLNAPYTRSMMES-MSQDPDMAARLLSSSPLMSNNPALQEQVRQMMPQFMAQMQN 382
            |||:..:|..........|.::| :::|      .||||..:|.|..||............|...
 Worm     1 MADSNDLMSEFQKLQQETSKIQSHLTKD------FLSSSAKLSENRVLQATQELCGKLTEKQKVQ 59

  Fly   383 PEVMNMLTNPDAMNAILQIQQGMEQLRSAAPGLVGTLGI 421
            .:.:|:|     ::|:.|||:...::.:....:...|.|
 Worm    60 DDTINLL-----LSALGQIQENQNKILNQFASMQSQLDI 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506
PABP-1234 <233..409 CDD:130689 22/90 (24%)
UBA_PLICs 501..537 CDD:270582
C16C8.11NP_494548.1 COG5391 <9..>111 CDD:227680 20/96 (21%)
ubiquitin 149..212 CDD:459726
Blue background indicates that the domain is not in the aligned region.

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