DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and C16C8.14

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_494545.1 Gene:C16C8.14 / 173689 WormBaseID:WBGene00015852 Length:233 Species:Caenorhabditis elegans


Alignment Length:112 Identity:20/112 - (17%)
Similarity:50/112 - (44%) Gaps:23/112 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 NPMVQQMMNNPDTMRQLI--TSN--PQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSMLQELM 205
            |..::.:|:...|.:..:  |.|  ..:|:..::....:::.|  ||:.:..:  :|..|:.::.
 Worm    62 NAFIENLMSELKTAKSKLNETENQISDLHEATKQQESQANLWN--DLVAKISD--KNLEMMLKIQ 122

  Fly   206 RSHDRAM------SNLESVP---------GGYSALQRIYRDIQEPMM 237
            :|.|..:      |.::.||         |.:..:..|:.|.:.|::
 Worm   123 KSQDLMIMKMQEGSAVQDVPIETEKSAKNGPFFEILVIWTDSRGPVV 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506
PABP-1234 <233..409 CDD:130689 1/5 (20%)
UBA_PLICs 501..537 CDD:270582
C16C8.14NP_494545.1 UBQ 170..228 CDD:214563 20/112 (18%)
Blue background indicates that the domain is not in the aligned region.

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