DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Ubqn

DIOPT Version :10

Sequence 1:NP_608344.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_313568.3 Gene:Ubqn / 1274444 VectorBaseID:AGAMI1_005820 Length:538 Species:Anopheles gambiae


Alignment Length:559 Identity:359/559 - (64%)
Similarity:437/559 - (78%) Gaps:33/559 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAE--GGSKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTL 63
            |||  ...|:|.::||||||:|::|:::|:.|||.|.:||:|||..||.:.||||||||||||||
Mosquito     1 MAENRASGKKITIMVKTPKDRKSIEIEDDAEIKDLKAIVAEKFETNPELVCLIFAGKIMKDTDTL 65

  Fly    64 QMHNIKDNLTVHLVIKAPTRNNEQPARQ-PADVRQTPFGLNQFGGLAGMEALGAGSNTFMDLQAR 127
            :.||||:.|||:|||||..|.:.:.||: ||||.||||||||.|||||:.|||.....|||||:|
Mosquito    66 KTHNIKEGLTVYLVIKAAPRADAESARRAPADVSQTPFGLNQLGGLAGLSALGGNQTNFMDLQSR 130

  Fly   128 MQNELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTM 192
            ||:|||:|.|::|:::|||:|||||||||||||::||||||.:|||||||||||||||:||||||
Mosquito   131 MQHELLDNPDLMRTVLDNPLVQQMMNNPDTMRQILTSNPQMQELMQRNPEISHMLNNPELLRQTM 195

  Fly   193 ELARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFAGLVDGGG 257
            |||||||||||||||||||:|||||||||||||||||||||||||||..    |||::|..:.|.
Mosquito   196 ELARNPSMLQELMRSHDRAISNLESVPGGYSALQRIYRDIQEPMMNATF----RNPYSGTSESGS 256

  Fly   258 -SGAGNNPQQGTENRNPLPNPWGGANSGT-NGTVGGSGAGNPTGDL--PPNNVLNTPAMRSLLQQ 318
             ||.|.|||||||||:||||||..|:||| :|..|.:|.|:...|.  .|..:||||||:|||||
Mosquito   257 TSGGGANPQQGTENRSPLPNPWSSASSGTGSGNRGAAGTGSAGTDAAGTPLGLLNTPAMQSLLQQ 321

  Fly   319 MADNPAMMQNLLNAPYTRSMMESMSQDPDMAARLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNP 383
            |::||::|.|:||:|.||||||:::.||.|||.|:|.:||::|:|.||:|:|.||||.|.|||||
Mosquito   322 MSENPSIMSNMLNSPATRSMMEALAADPAMAANLMSQNPLLANSPGLQDQLRTMMPQLMRQMQNP 386

  Fly   384 EVMNMLTNPDAMNAILQIQQGMEQLRSAAPGLVGTLGIPP----PPPGAGTGTNPASGDGSGGNS 444
            ||..|:|||.|:||||||||||||||||||||:.|:||||    |||..|:|       |:|   
Mosquito   387 EVQQMVTNPQALNAILQIQQGMEQLRSAAPGLMSTMGIPPMPGAPPPTTGSG-------GTG--- 441

  Fly   445 GASTNNVSPSSGLNAGTGTPNLAPGGGPNAQLFNDFMMRMLNGM-SNNADNTQPPEVRYQSQLEQ 508
              :||..|.::....|.|..     ...|..||::||.||:||| |..||...|||.||::||||
Mosquito   442 --ATNTASAATTATGGAGAQ-----ASNNDALFSEFMSRMINGMASGTADTNIPPEERYRAQLEQ 499

  Fly   509 LNAMGFVNRDANLQALIATFGDINAAVERLLSLNQLSLS 547
            |.|||||||:||||||||:|||||||:||||:|.|||||
Mosquito   500 LTAMGFVNREANLQALIASFGDINAAIERLLALGQLSLS 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_608344.1 Ubl_PLICs 7..79 CDD:340506 45/71 (63%)
PABP-1234 <233..409 CDD:130689 109/179 (61%)
UBA_PLICs 501..537 CDD:270582 29/35 (83%)
UbqnXP_313568.3 None

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