DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubqn and Oas1c

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_291019.1 Gene:Oas1c / 114643 MGIID:2149633 Length:362 Species:Mus musculus


Alignment Length:152 Identity:29/152 - (19%)
Similarity:58/152 - (38%) Gaps:27/152 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QPARQPADVRQTPFGLNQFGGLAGMEALGAGSNT----FMDLQARMQNELLNNGDMLRSLMDNPM 147
            |.|..|..|.:...|    |......||...|..    |.:.....:.:|...|:.:..:..: :
Mouse    48 QGAAHPVRVSRVVMG----GSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKH-L 107

  Fly   148 VQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPS--MLQELMRSHDR 210
            .|.....|..::..:.|:.:     ..:..:|..|::|: |:|.:|....|:  :|.||      
Mouse   108 CQLQQEKPFKVKFEVQSSEE-----PNSRSLSFKLSSPE-LQQEVEFDVQPAYDVLYEL------ 160

  Fly   211 AMSNLESVPGGYSALQRIYRDI 232
             .:|..:.|..|:   ::|..:
Mouse   161 -RNNTYAEPQFYN---KVYAQL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563
hPLIC_N 9..79 CDD:176403
STI1 322..368 CDD:128966
UBA_PLICs 501..537 CDD:270582
Oas1cNP_291019.1 NT_2-5OAS_ClassI-CCAase 27..>157 CDD:143390 22/119 (18%)
OAS1_C 173..355 CDD:313619 1/6 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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