DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubqn and Ubqln1

DIOPT Version :9

Sequence 1:NP_001285457.1 Gene:Ubqn / 32977 FlyBaseID:FBgn0031057 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_446199.2 Gene:Ubqln1 / 114590 RGDID:620745 Length:582 Species:Rattus norvegicus


Alignment Length:575 Identity:285/575 - (49%)
Similarity:377/575 - (65%) Gaps:65/575 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKDN 71
            |.:.|.|||||:|:...|.|:|.::.||..::::|::..:||||||||||:||.|||..|.|.|.
  Rat    26 KIMKVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHIDQLVLIFAGKILKDQDTLSQHGIHDG 90

  Fly    72 LTVHLVIKAPTRNNEQPARQ-----------PA--------DVRQTPFGLNQFGGLAGMEALGAG 117
            ||||||||...|..:..|:|           ||        ....:.|||...|||||:.:||..
  Rat    91 LTVHLVIKTQNRPQDNSAQQTNTTGNSVTSSPAPDSNPTSGPAANSSFGLGGLGGLAGLSSLGLN 155

  Fly   118 SNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHML 182
            :..|.:||::||.:||:|.:|:..:|:||.||.|::|||.|||||.:||||..|:||||||||||
  Rat   156 TTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHML 220

  Fly   183 NNPDLLRQTMELARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRN 247
            ||||::|||:||||||:|:||:||:.|||:|||||:||||:||:|:|.||||||:|||.|.||.|
  Rat   221 NNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGN 285

  Fly   248 PFAGLVDGGGSGAGNNPQQGTENRNPLPNPW----------GGANSGTNGTVGGSGAGNPT---- 298
            |||.||....|..|..|.: ||||:||||||          .|:...|..||..| |||.|    
  Rat   286 PFASLVSSPSSAEGTQPSR-TENRDPLPNPWAPQTPQSSPASGSTGSTTNTVSTS-AGNATSTPA 348

  Fly   299 --GDLPPN-------NVLNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPDMAARLLS 354
              |...||       ::.|||.|:|||||:.:||.:|||:|:|||.||||:|:||:||:||:::.
  Rat   349 GQGTSGPNLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMML 413

  Fly   355 SSPLMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQIQQGMEQLRSAAPGLVGTL 419
            ::||.:.||.||||:||.:|.|:.|||||:.::.::||.||.|:||||||::.|.:.||||    
  Rat   414 NNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL---- 474

  Fly   420 GIPPPPPGAGTGTNPASGDGSGGNSGASTNNVSPSSGLNAGTGTPNLAPGGGPNAQLFNDFMMRM 484
             ||...||...|       .|||.:|.:..:.:|....|         |.||........|:.:|
  Rat   475 -IPGFTPGLAAG-------NSGGPAGTTAPSTAPGEDTN---------PQGGAAEPGHQQFIQQM 522

  Fly   485 LNGMSNNADNTQPPEVRYQSQLEQLNAMGFVNRDANLQALIATFGDINAAVERLL 539
            |..::......|.||||:|.|||||:||||:||:|||||||||.||||||:||||
  Rat   523 LQALAGVNPQLQSPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbqnNP_001285457.1 UBQ 9..79 CDD:214563 37/69 (54%)
hPLIC_N 9..79 CDD:176403 37/69 (54%)
STI1 322..368 CDD:128966 26/45 (58%)
UBA_PLICs 501..537 CDD:270582 28/35 (80%)
Ubqln1NP_446199.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 285/575 (50%)
UBQ 28..98 CDD:214563 37/69 (54%)
hPLIC_N 28..98 CDD:176403 37/69 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..136 5/33 (15%)
Interaction with UBXN4. /evidence=ECO:0000250|UniProtKB:Q9UMX0 169..422 141/254 (56%)
STI1 173..210 CDD:128966 20/36 (56%)
TFIIA 285..>447 CDD:281188 77/163 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..365 31/81 (38%)
STI1 384..416 CDD:128966 18/31 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..513 11/47 (23%)
UBA_PLICs 539..578 CDD:270582 32/39 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354343
Domainoid 1 1.000 390 1.000 Domainoid score I756
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H137258
Inparanoid 1 1.050 519 1.000 Inparanoid score I1225
OMA 1 1.010 - - QHG54270
OrthoDB 1 1.010 - - D1553668at2759
OrthoFinder 1 1.000 - - FOG0001496
OrthoInspector 1 1.000 - - otm44857
orthoMCL 1 0.900 - - OOG6_100933
Panther 1 1.100 - - O PTHR10677
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X761
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.810

Return to query results.
Submit another query.