DRSC/TRiP Functional Genomics Resources

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Protein Alignment dome and Ptprq

DIOPT Version :9

Sequence 1:NP_523412.1 Gene:dome / 32976 FlyBaseID:FBgn0043903 Length:1282 Species:Drosophila melanogaster
Sequence 2:NP_075214.2 Gene:Ptprq / 360417 RGDID:620779 Length:2302 Species:Rattus norvegicus


Alignment Length:1220 Identity:266/1220 - (21%)
Similarity:429/1220 - (35%) Gaps:375/1220 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 NFTQP--PNTVITKYNISYNTNNDWRYSNTLDCNFDSAPVVTCNLTD--DNYKRFSETFYFRLSI 203
            :|..|  ||.:|.||.|....:|          :.::..:.|.:||.  ...|:::. :...:|.
  Rat   781 SFLPPRSPNGIIQKYTIYLKRSN----------SHEARTINTTSLTQTIGGLKKYTH-YVIEVSA 834

  Fly   204 SNALGH--ETQPITINHFERLVPARPGQNLTLLNRTESSVCLSWEMPRRSN----YNRGLVWQVR 262
            |...|.  .::||:| ..|...|..|.||.::...:..:|.|||:.|...|    |....||.  
  Rat   835 STLKGEGIRSRPISI-LTEEDAPDSPPQNFSVKQLSGVTVMLSWQPPLEPNGIILYYTVYVWD-- 896

  Fly   263 VTPQNFEPITRPSWRNHTLTIKDTLCLTELPF-AGYNYTLRVRVRANQNNTLWSEPMIYAFATAP 326
                      :.|.|....| :.:|.|::|.: ..|...:....|....|   :...|..|.|..
  Rat   897 ----------KSSLRAINAT-EASLVLSDLDYNVDYGACVTASTRFGDGN---ARSSIINFRTPE 947

  Fly   327 APPRRPPRVTYGSFYVYSSEKAMRFYWEPLEEHELNGPDFRYSISEYRINGTAVDP-GLIKV--E 388
            ..|..||...:   ||..|..::..:|.|  ..:.||....||:.....:||.|.. .|::|  |
  Rat   948 GEPSDPPNDVH---YVNLSSSSIILFWTP--PVKPNGIIQYYSVYYQNTSGTFVQNFTLLQVTKE 1007

  Fly   389 SN----SAMIDHWSMSAVHHFLIRSSNSQGLSVNA-------TPMTI--GPISNRDFKVREPRNI 440
            |:    ||.|...::.:.:.|.:.:|.|.|....:       |...|  ||:.|..|:       
  Rat  1008 SDNVTVSARIYRLAIFSYYTFWLTASTSVGNGNKSSDIIHVYTDQDIPEGPVGNLTFE------- 1065

  Fly   441 RSVYHPTNKSYTLSWDPPSDQRELQNYTVFWCVPKPGLQS----------ECEGSIRFAEVASGL 495
             |:   ::.:..:||:|||.    .|..||:.:.....||          ..|.||.|.:    |
  Rat  1066 -SI---SSTAIHVSWEPPSQ----PNGLVFYYLSLNLQQSPPRHMIPPLVTYENSIDFDD----L 1118

  Fly   496 HHFTTSPDQLLTLHMAVSANY-QSHNTGLHWAICSSDKKDDLAKMEPSIDV---ATSTSLTVSWS 556
            ..:|   |.:..:..:....: :::.|.||     ...::|:....|.|:.   .:|||:.:||.
  Rat  1119 EKYT---DYIFKITPSTEKGFSETYTTQLH-----IKTEEDVPDTPPIINTFKNLSSTSILLSWD 1175

  Fly   557 E--RVCAVILAGYNLTYCQRSAGRPDNCTTVTIDRYTNKHVIQNLVPYTDYSVKMLMYSDSRVSK 619
            .  :....|| ||:||.    .|...|.|.||..   |..|::.|.|:|.||    .::.:|..|
  Rat  1176 PPLKPNGAIL-GYHLTL----QGPHANHTFVTSG---NHIVLEELSPFTLYS----FFAAARTMK 1228

  Fly   620 ---YSDELVNRTGEAAP-SQPRELQLIRVTSDSVELAWKPPLLANGVVRAYEGTFRSLHDNVTDT 680
               .|..|...|.|:|| :.|:.|.||..|||.|.|.|.|..|..|:|:.|  :|: :|::.|||
  Rat  1229 GLGPSSILFFYTDESAPLAPPQNLTLINYTSDFVWLTWSPSPLPGGIVKVY--SFK-IHEHETDT 1290

  Fly   681 F---RVSA-SADELVNNEKPITYRLGNLTAFTKYEISVRARTVYPSEPSNVILFSTAIGVPSPPQ 741
            .   .:|. ..|..:...:|::....:::||||....        ::.|||:.|:|...||.   
  Rat  1291 VFYKNISGLQTDAKLEGLEPVSTYSVSVSAFTKVGNG--------NQYSNVVEFTTQESVPE--- 1344

  Fly   742 LYVINNPD------QSSRLDWEPPRTPAGRIDFYEISLRDNNASCLTSTILPGRNLSYVMATPRC 800
              .:.|.:      ||..:.|:|||...|.|..|.|::..|      ||.:..|:.:|...  :.
  Rat  1345 --AVRNIECVARDWQSVSVRWDPPRKANGIIIHYMITVGGN------STKVSPRDPTYTFT--KL 1399

  Fly   801 TSHNPFQLAVRAINVEQHPQLNGADAAEGAVLLMSTN-GKGCEARTD--ALGE------------ 850
            .::..:...|||                      ||: |:|.|:|.|  .|.|            
  Rat  1400 LANTSYVFEVRA----------------------STSAGEGNESRCDISTLPETVPSAPTNVAFS 1442

  Fly   851 ----------------------------------------EERLQFE----AYAANMT------- 864
                                                    ||.::.:    .|.||.|       
  Rat  1443 NVQSTSATLTWTKPDTIFGYFQNYKITTQLRPQKCREWEPEECIEHQKDQYLYEANQTEETVHGL 1507

  Fly   865 -AYRLYR--------------SDWGIYGFICT------PD-----THSVKAMYQTIEVTVA--IL 901
             .:|.||              |:|     |.|      ||     .|.|......|.::.:  .:
  Rat  1508 KKFRWYRFQVAASTNVGYSNASEW-----ISTQTLPGPPDGPPENVHVVATSPFGINISWSEPAV 1567

  Fly   902 VLGVIFYLVYKKYRKMSDIGLVLPQGIMETMKKPID---------------MGGLGLGLGPDSSV 951
            :.|..|||:..|.....|..:...:...|.....|:               :|.:.... .|...
  Rat  1568 ITGPTFYLIDVKSVDDDDFNISFLKSNEENKTTEINNLEVFTRYSVVITAFVGNVSRAY-TDGKS 1631

  Fly   952 SGGIVCTRVDDSPPYTPQDLPHDFSSCGSESSKLLLRTASSSGGGG-------CVDRDGYDDN-- 1007
            |..::.|.::..|...|.::  .|.....|.:|..|.....|...|       .|.|:  ||.  
  Rat  1632 SAEVIITTLESVPKDPPNNM--TFQKIPDEVTKFQLTFLPPSQPNGNIRVYQALVYRE--DDPTA 1692

  Fly  1008 ---HETGPISAVGPPTSYLAMRHGLLVQNDRERERERDREQEREREQQQQQRESEMDREQSCTNG 1069
               |....|...  .||.:||..||.                                       
  Rat  1693 VQIHNLSIIQKT--DTSVIAMLEGLK--------------------------------------- 1716

  Fly  1070 YIKPTQMKSWGGNGPSDNDHTFSVPSTAMTAPMSQPLSQIPLSGYVPVPI-PQSRFNPAPVQPFG 1133
                      ||       ||:::...|:.:..:.|..|:.::..:..|. |:|:  |.|::   
  Rat  1717 ----------GG-------HTYNISVYAINSAGAGPKVQMRITMDIKAPARPKSK--PIPIR--- 1759

  Fly  1134 SPAVPSAATAAAASTFFPPAHLLNMDNYVQASDLHKLKPLVAAPLSQTGG 1183
             .|.......:...|...|....|.|:    ..:..::.|||...:|..|
  Rat  1760 -DATGKLLVTSTTITIRMPICYYNDDH----GPIRNVQVLVAETGAQQDG 1804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domeNP_523412.1 fn3 541..621 CDD:278470 27/87 (31%)
FN3 633..732 CDD:238020 32/103 (31%)
PtprqNP_075214.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46957
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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