DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ssu72 and ssu72

DIOPT Version :9

Sequence 1:NP_001285455.1 Gene:Ssu72 / 32973 FlyBaseID:FBgn0031054 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_957022.1 Gene:ssu72 / 393701 ZFINID:ZDB-GENE-040426-1689 Length:194 Species:Danio rerio


Alignment Length:192 Identity:115/192 - (59%)
Similarity:147/192 - (76%) Gaps:0/192 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSKLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRD 68
            |..|.||||||||.||||||||.|:|:||:|||:|||..|||||.|.||||:|:|.|.||.:|.|
Zfish     3 PHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPAPDKPNIYDFKTTYEQMYND 67

  Fly    69 LESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVMHMESMESVDNR 133
            |..||||.|||||:|||||||:|||..|||||..::|||:::|.||||||.|:..:.|.|....:
Zfish    68 LVRKDKELYTQNGILHMLDRNKRIKSRPERFQSCRDQFDLVITCEERVYDQVLEDLNSREQESFQ 132

  Fly   134 PVHVLNVDVVDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 195
            ||||:|||:.||.|:|.:|||:|.::...:..:.|::|::|||:|||||:..|..||||.||
Zfish   133 PVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEEKSHRPFLHSVCFY 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssu72NP_001285455.1 Ssu72 7..195 CDD:282565 112/187 (60%)
ssu72NP_957022.1 Ssu72 6..194 CDD:282565 112/187 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595009
Domainoid 1 1.000 242 1.000 Domainoid score I2191
eggNOG 1 0.900 - - E1_COG5211
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6754
Inparanoid 1 1.050 245 1.000 Inparanoid score I3272
OMA 1 1.010 - - QHG54555
OrthoDB 1 1.010 - - D1304061at2759
OrthoFinder 1 1.000 - - FOG0002112
OrthoInspector 1 1.000 - - oto39019
orthoMCL 1 0.900 - - OOG6_103165
Panther 1 1.100 - - LDO PTHR20383
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1403
SonicParanoid 1 1.000 - - X1400
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.