DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ssu72 and T13C2.7

DIOPT Version :10

Sequence 1:NP_608342.1 Gene:Ssu72 / 32973 FlyBaseID:FBgn0031054 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001022345.2 Gene:T13C2.7 / 3565879 WormBaseID:WBGene00020482 Length:292 Species:Caenorhabditis elegans


Alignment Length:52 Identity:11/52 - (21%)
Similarity:20/52 - (38%) Gaps:21/52 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 LMGAFV----------------ITDMINMMAKSTDLDNDIDELIQEFEERRK 185
            ::|||.                :.|.:.:|..:..:..::||.     ||||
 Worm    52 IIGAFASVIVLLMFRSIRPHQSLDDQVTLMMSTMKMRVEVDEY-----ERRK 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssu72NP_608342.1 Ssu72 7..195 CDD:461410 11/52 (21%)
T13C2.7NP_001022345.2 None

Return to query results.
Submit another query.