DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssu72 and SSU72L6

DIOPT Version :10

Sequence 1:NP_608342.1 Gene:Ssu72 / 32973 FlyBaseID:FBgn0031054 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001400933.1 Gene:SSU72L6 / 136157 HGNCID:43627 Length:194 Species:Homo sapiens


Alignment Length:191 Identity:96/191 - (50%)
Similarity:134/191 - (70%) Gaps:0/191 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SKLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDL 69
            |.|.|||||.||:|||||||:.|.:||.:|||:||...|:|||...:.|.||:|.|.|:::|.||
Human     4 SPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESHVRLPGRRPNHPVVYDFATTYKEMYNDL 68

  Fly    70 ESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTKEQFDIIVTVEERVYDLVVMHMESMESVDNRP 134
            ..||:|.||.||:||:|.||.|||..|||||:..|.||:|.|.||||||.||..:.|.|....:|
Human    69 LRKDRECYTHNGILHILGRNERIKPGPERFQECTEFFDVIFTCEERVYDTVVEDLCSREQQTFQP 133

  Fly   135 VHVLNVDVVDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY 195
            |||:|:|:.|..|.|::|||:|.::...:.:|.|:::.::||:.:.||:..:..||:|.||
Human   134 VHVINMDIKDTLEGAILGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAGKSFLHTVCFY 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssu72NP_608342.1 Ssu72 7..195 CDD:461410 93/187 (50%)
SSU72L6NP_001400933.1 Ssu72 6..194 CDD:461410 93/187 (50%)

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