DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp21 and MSN5

DIOPT Version :9

Sequence 1:NP_001285453.1 Gene:Ranbp21 / 32970 FlyBaseID:FBgn0031051 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_010622.1 Gene:MSN5 / 851935 SGDID:S000002743 Length:1224 Species:Saccharomyces cerevisiae


Alignment Length:1437 Identity:275/1437 - (19%)
Similarity:487/1437 - (33%) Gaps:437/1437 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AAELASAIDLVMNPMTQQQARLEAYMACERFKEESPMCAQV---GLFLASSPQSNQQVRHFGLQL 72
            |:::.||:|::.:|.:....|.||    ::|.:|..:|::.   |..:|....:|..:::|||.|
Yeast     6 ASQIVSALDVIYSPKSNNSQRQEA----QKFLDEVKLCSESPFWGYEIALQNPTNSILKYFGLGL 66

  Fly    73 IEYTIKYRWNCITHEEKVYIKDNAIKMLNVGVGPAEDRSLLPTKDALSRIIVEMIKREWPQ---- 133
            :::.:|..||.....::|.:: ..:..||.||...:.|.:   |:.|:.:.||:.||.|.:    
Yeast    67 LDHAVKKNWNDYDEGKRVALR-KWVMELNFGVQDYDTRYI---KEKLATLWVEVAKRTWGEALKQ 127

  Fly   134 ----------QWSDLLPELSQACTKGEAQTELVLLVFLRLVEDVALLQTIESNQRR--------- 179
                      .|.|:...|.:.....::..||.|::|..|.|||.||..:...:|.         
Yeast   128 TNPTEEQLLTSWVDMDNNLFELWNINQSSRELALIIFRILFEDVFLLDDLIVLKRMTVIQPLCVM 192

  Fly   180 --------------KDMYQALNNNMNDIFEFFLRLVEQHVTAFRETTRLCNYTKANAHSRVVEMV 230
                          .|.:.....|....|..::             ..|.|..:.| :|..:..:
Yeast   193 IVCPIEVFAIKYKFSDKWTKFKANEEGWFSVWI-------------PELNNALQQN-NSEYIIRL 243

  Fly   231 LLTLSGFVEWVSIQHIMSSNGKLMHFL-CILLNDKAFQCNAAECLAQITNR--KGQTKERKPLLQ 292
            |.||...:.| .:..::..|..|...| |:..|....|..|.:.:..:..|  ..::..:..:.:
Yeast   244 LETLKTCLNW-PLTEVIVRNDVLSSLLTCLSSNIPRAQSMALDSIHILLTRPYSNESHYQMTIDR 307

  Fly   293 LF-NEEPLRYIYQASQI-PADTSSTLAVEQHLNFLKKLLQVL-------------NGMAQQLVAL 342
            :| |.:.|..:|::... |.|...    |.....:||.:.::             ||..|:...|
Yeast   308 VFDNMDLLDSVYESLLFDPTDDID----ETKYPIIKKFVDMISCLYVCVPKIKETNGQIQKYFKL 368

  Fly   343 WGKDDATQRPVHLEVLLECLLLLVQHPSLGLSHGSALIWQLLLKHEPSSKDFAMVNYIPKLIHTI 407
                               :|....:|||.:|..:..:|...|:::         .|:|||...:
Yeast   369 -------------------VLKTTYNPSLIVSGLTLDLWCTCLRND---------EYLPKLEKYV 405

  Fly   408 APRIVK-----LPYPASASSPASLSTEAYIRLEHDSEEEYALYFFRCRTDFLEIFRLATLVQPLV 467
            .|.:::     |.|........|   :.:..::..|:.|:..:....|....:|.||.:.|:..:
Yeast   406 IPDLLQFAADALVYYEQIDGHIS---KKFAEIDFQSKSEFQTFCSTYRKRIRDIIRLISCVELDL 467

  Fly   468 TYGYCEQWLQQRLRNAQIEADAEVKSGNVSCSVLDPVYLEWDALVSVLDGVLSRILLV------- 525
            ||    .||..||.|        ..|......||...:|  |..:....|.||:.::|       
Yeast   468 TY----DWLNNRLNN--------YFSSPFGQQVLSSTFL--DHKLEPYLGALSQYMIVECFINGC 518

  Fly   526 --------------AERPSVPAGLRLL-EECLKLETINPLTYSILLSCISALFVFLSMSACQITA 575
                          .:..|:...|.:| .:.:.|....||   :|...|....:||:|....:..
Yeast   519 IRWKIWYPTGDDYDEKLDSILQKLEILSNQLIALNLREPL---LLKKQIQNFALFLTMLKDNVLF 580

  Fly   576 TNCVAMSGVSLLPRVLDKIFRALVMKPPN-ELEKVQAKS--AKNLRRHAASLLVKLAHKYPLLLL 637
            |             :|:||..:..|..|. .||:..|:|  .::||......|.::|...|..|.
Yeast   581 T-------------LLEKIITSATMDYPEINLEERGAESDAVRDLRYACGIELNRMALLMPESLK 632

  Fly   638 PVFEQINGHVELLLKEPGKHQLCRLMRTTLQEALILISNHFCDFERQTLFIEHIVQDKRTEWLAF 702
            .::..:...:..::.....|:     :.:.:..|::|                            
Yeast   633 KIYPDLESVIARIMPNLSYHE-----KISFKSFLLII---------------------------- 664

  Fly   703 GDALKSPLDFMS--FVGLDKPPIFAVEGAVTLQNRSRLLDALHVV---LGVVKRCTW-------- 754
              .|||.||...  |..:..|.:.|.....|:..    |..||..   ||:|:...:        
Yeast   665 --VLKSSLDMKEERFAAIVDPELLAWSDKTTVVG----LSDLHWFMERLGIVQIAEYFQRRDIDE 723

  Fly   755 -------PDDPE---------RAQRGGFVIGCT---------------------ELGNPICRNPA 782
                   |.|.|         :..:..|.:..|                     :|..|      
Yeast   724 NSDLLSIPIDDEGKELKSELTKRWQSLFPVRATRMFIHYSMQSIKTDEEFKMLQDLWRP------ 782

  Fly   783 TKHIVPLLSHVLSLMRVLNELFAPEALQALSE------GYRGIHGMMEHEKKLLMGICALPTDPL 841
              .|||:|.::..|:..|.....|:..:.|..      .|..|....|         ........
Yeast   783 --RIVPILPYITRLLYQLQSYHDPDNWKGLPTVVQSFVKYSTIERFWE---------AGASNKSK 836

  Fly   842 DTTIRSEPTAFEKMQTF------MMMVTEGCYHLMGSAGPSLGRDLYQLMGLSDAIVTNVF---- 896
            |..|.....|.:.::.|      ::..|.....|:.||..|||...|.|....|.::.::.    
Yeast   837 DEFIDEHMKAMQTLRDFADSVGHIIRYTREYTLLVLSAISSLGSVFYLLDESPDLLLNSIAIFKP 901

  Fly   897 SRMDLVP---DYRLRPIIRVFFKPFVYSCPP----SFYDSVLVPLFAHLAPLMCERLTRRWIYIA 954
            ...::.|   .:..:.|:.:..:|.:..||.    .|..:.|..||..|..|:|::         
Yeast   902 GSNEISPGVSTHGWKHIMNIAIRPILKGCPKDCLGKFMPAFLPKLFEILDLLLCQK--------- 957

  Fly   955 SLYESGQLDGEVND--------TQEVLEDQLNRTLTREYLDVLKIALVGGQIGADHVAAGANANS 1011
              :.|...|.::|.        |:|:||:.|.|.||..   |::|.:       |.|..| |||.
Yeast   958 --WSSHMNDMDMNPVPTDDDQMTEEILEENLLRQLTTV---VVRIVI-------DCVGQG-NANP 1009

  Fly  1012 NSVAMENEEHSMDSAPQSRAIQSALLSDIISDLGGKLLRNGLIGNYVLMTLLK----AIAWNDGM 1072
            ||.......|.|    :.|.|       |.:||.            .|...||    .|::.|..
Yeast  1010 NSAKSRLNNHQM----EMRKI-------IFNDLN------------TLAPFLKLLNHLISFKDTK 1051

  Fly  1073 CSMKAVNIAAPVMRFLAAEKLMDENKAVTAFT-AVLQGMQVH---------GQHEANQSGLVTLG 1127
            ||..::    .||:......|...|.....|| .|::.:.::         ..|||    |....
Yeast  1052 CSFNSI----LVMKCCLTSVLNQNNTVDEYFTFEVMKNLLLNVLCNSAFKDSFHEA----LYAFT 1108

  Fly  1128 VQFYELLRPQFPI-------------LSEVLQHIPSVNAADIQK------FDEKIAVAPVKGNKV 1173
            |.|..|.: ::|.             :.|:.:::.||:....|:      .|...:.:..:...|
Yeast  1109 VIFLTLCK-EYPSARAFLFEISNGYNIDELYRNLRSVDEYKTQRALMIDFIDWVKSTSGKEDGNV 1172

  Fly  1174 DRA---------KKDIFKKLTAQLVGRSVNQLFRHEVQIANLPPMQSHKAKGSM--------GTT 1221
            |.|         ::.|.||...:|:                    :.:|..|.|        |..
Yeast  1173 DHAGDERKRQEKREAILKKANERLI--------------------KKNKENGDMLDDPNIEDGAV 1217

  Fly  1222 ADIMDSN 1228
            .::.|.|
Yeast  1218 GNLFDDN 1224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp21NP_001285453.1 IBN_N 34..101 CDD:281761 15/69 (22%)
Xpo1 116..274 CDD:285575 39/195 (20%)
MSN5NP_010622.1 CRM1 23..>172 CDD:227432 39/156 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343211
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5101
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5743
OMA 1 1.010 - - QHG55404
OrthoFinder 1 1.000 - - FOG0003520
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103801
Panther 1 1.100 - - LDO PTHR11223
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1937
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.730

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