DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp21 and xpo5

DIOPT Version :9

Sequence 1:NP_001285453.1 Gene:Ranbp21 / 32970 FlyBaseID:FBgn0031051 Length:1241 Species:Drosophila melanogaster
Sequence 2:XP_017214411.1 Gene:xpo5 / 558662 -ID:- Length:1216 Species:Danio rerio


Alignment Length:1256 Identity:444/1256 - (35%)
Similarity:680/1256 - (54%) Gaps:74/1256 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALAAELASAIDLVMNPMTQQQARLEAYMACERFKEESPMCAQVGLFLASSPQSNQQVRHFGLQLI 73
            ||..||..|::::|...:.|..||||:...|.|||:||.|.:.||.||...|: ..:||||||::
Zfish     7 ALCEELIKAVNVMMEAESSQTYRLEAFKFIEDFKEKSPFCVECGLQLAEKSQT-AVIRHFGLQIL 70

  Fly    74 EYTIKYRWNCITHEEKVYIKDNAIKMLNVGVGPAEDRSLLPTKDALSRIIVEMIKREWPQQWSDL 138
            |:.:|:|||.:..::|:.:|:..:.||:.|..|..... ...|||||||:||||||||||||.|:
Zfish    71 EHVVKFRWNNMAPQDKLQLKNCTMGMLSNGTHPILQEE-CHVKDALSRIVVEMIKREWPQQWPDM 134

  Fly   139 LPELSQACTKGEAQTELVLLVFLRLVEDVALLQTIESNQRRKDMYQALNNNMNDIFEFFLRLVEQ 203
            |.|:......|:||||||:||.|||.|||...||:.| |||:|:.|.|..||:.:|.|.|.:::.
Zfish   135 LKEMEALTALGDAQTELVMLVLLRLAEDVITFQTLPS-QRRRDIQQTLTQNMDSVFTFLLGILQL 198

  Fly   204 HVTAFRETTRLCNY-TKANAHSRVVEMVLLTLSGFVEWVSIQHIMSSNGKLMHFLCILLNDKAFQ 267
            ||..:.:...:... .|..||.||....|.||:|:::|||:.||.|.|.:|:..||:||::...|
Zfish   199 HVNEYSKMKCVAGLDLKMKAHLRVGVATLNTLAGYIDWVSLSHITSQNCRLLEILCLLLSEPELQ 263

  Fly   268 CNAAECLAQITNRKGQTKERKPLLQLFNEEPLRYIYQASQIPAD------TSSTLAVEQHLNFLK 326
            ..|||||....:|||:.:||||.:.||:|..:.||..|:| .||      .||....|:...|||
Zfish   264 LEAAECLLIAISRKGKLEERKPFMVLFDEAAMNYILSAAQ-SADGAALCNQSSGGIDERRYTFLK 327

  Fly   327 KLLQVLNGMAQQLVALWGKDDATQRPVHLEVLLECLLLLVQHPSLGLSHGSALIWQLLLKHEPSS 391
            :|.|||..:..|:.:|.|.|...|.||:|...||.||....|||..|...:.:.|.::.:||..|
Zfish   328 RLCQVLCALGSQVCSLVGSDVEVQVPVNLNKYLEALLAFTTHPSQFLRSSTQMTWGIIFRHEILS 392

  Fly   392 KDFAMVNYIPKLIHTIAPRIVKLPYPASASSPASLSTEAYIRLEHDSEEEYALYFFRCRTDFLEI 456
            ||..:.....|.:......:||..:|:....|..    .:.|::.||:|::...|...|....|.
Zfish   393 KDPVVGQMAIKYLRATRINLVKTGFPSKNDCPGC----EFSRVDFDSDEDFNSSFNSSRAQQGEA 453

  Fly   457 FRLATLVQPLVTYGYCEQWLQQRLRNAQIEADAEVKSGNVSCSVLDPVYLEWDALVSVLDGVLSR 521
            .||...:.|...:.....|:|.::...........|:....||.|.|..::|:|:.:..:.|..:
Zfish   454 VRLTCRIVPFKAFQIARDWMQYQISTPIDAGKTTAKTEKGLCSPLSPSVVQWEAMTTFTENVFGQ 518

  Fly   522 ILLVAERPSVP--AGLRLLEECLKLETINPLTYSILLSCISALFVFLSMSACQITATNCVAMSGV 584
            :..:.|:..:|  .|:.||:..:..||.:||..|.:|:.:|.||..|:...              
Zfish   519 LFKILEKEKLPIDEGMALLQIAVNFETRDPLILSCVLTIVSTLFPILTHRP-------------- 569

  Fly   585 SLLPRVLDKIFRALVMKPPNELEKVQAKSAKNLRRHAASLLVKLAHKYPLLLLPVFEQINGHVEL 649
            ..||:||.|||.|:..:..:|.:..:.::.||:||||.|.::::...|...:||.|:.:..||:.
Zfish   570 HFLPQVLFKIFSAITFELVDERKAPRTRAVKNVRRHACSSIIRICRDYSDFMLPCFDLMYEHVKR 634

  Fly   650 LLKEPGKHQLCRLMRTTLQEALILISNHFCDFERQTLFIEHIVQDKRTEWLA--FGDALKSPLDF 712
            |..:  :..|.:|.:..|.||||||||.|.|:::|..|:|.::......||:  ....|..|..|
Zfish   635 LFSD--ELLLTQLEKCALMEALILISNQFKDYKKQKAFLEELMAPVTALWLSEEMRSVLWDPATF 697

  Fly   713 MSFVGLDKPPIFAVEGAVTLQ----NRSRLLDALHVVLGVVKRCTWPDDPERAQRGGFVIGCTEL 773
            ::|||.|:    .:..:.|.:    ||||:...:|.:||||||..||.|.::|:.||||:.....
Zfish   698 LTFVGADQ----EISDSDTDEQMGINRSRISLCVHTILGVVKRARWPADADQAKAGGFVVRTASD 758

  Fly   774 GNPICRNPATKHIVPLLSHVLSLMRVLNELFAPEALQALSEGYRGIHGMMEHEKKLLMGICALPT 838
            |.|:.|||..:.:..||.::|:|:|..|.||.||.:..||:.:..::.:.:.||..::||..:..
Zfish   759 GTPVYRNPCAEALQALLPNLLALIRTNNSLFLPENITRLSKTFARVYDITDMEKNCVLGISQVVL 823

  Fly   839 DPLDTTIRSEPTAFEKMQTFMMMVTEGCYHLMGSAGPSLGRDLYQLMGLSDAIVTNVFSRMDLVP 903
            |..:..:..  ...|:||.|...:.|.|||::|:.||.|.:|.|.:.||::.||.:.|:.:|.||
Zfish   824 DSYEAAVYK--NFAERMQGFFSSLFENCYHVLGNVGPCLQQDFYGIEGLAEQIVGSAFNHLDSVP 886

  Fly   904 DYRLRPIIRVFFKPFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRWIYI---ASLYESGQLDGE 965
            |:||||:||:|.|..|.|||..:||.:|.||...|...:.:||..||..|   |||  |.|.:.|
Zfish   887 DHRLRPLIRLFMKQLVISCPHEYYDRLLCPLLGPLFSYLLQRLNFRWQIINQRASL--SAQEEEE 949

  Fly   966 VND----TQEVLEDQLNRTLTREYLDVLKIALVGGQIGADHVAAGANANSNSVAMENEEHSMDSA 1026
            ..:    |||::|:||.|.:|||.:|:|.:..:      .......|||......:.|..|||| 
Zfish   950 AYEENHVTQEMVEEQLLRLVTREVMDLLSVTCI------TRKCPEVNANKEEADGDEEMVSMDS- 1007

  Fly  1027 PQSRAIQSALLSDIISDLGGKLLRNGLIGNYVLMTLLKAIAWNDGM-CSMKAVNIAAPVMRFLAA 1090
              |:..|....||.:||||..||::..|...||......::|.|.: |...|..:...:::.:..
Zfish  1008 --SQGNQVNTPSDELSDLGKCLLQSEDIYMTVLTICFNCLSWKDTVNCQRTAGVLCWTLLKQVQG 1070

  Fly  1091 EKLMDENKAVT-AFTAVLQGMQVHGQHEANQSGLVTLGVQFYELLRPQFPILSEVLQHIPSVNAA 1154
            ..|:.|  ||| .|.:||:|:|:|||||.....|..|.:..||.|||::..|..::..||.|.|.
Zfish  1071 GNLLPE--AVTWLFASVLKGLQMHGQHEGCNVALTQLALLIYESLRPRYAELRLIMNQIPDVQAD 1133

  Fly  1155 DIQKFDEKIAVAPVKGNKVDRAKKDIFKKLTAQLVGRSVNQLFRHEVQIANLPPMQSHKAKGSMG 1219
            .:::||:||  .|......::.||:.|::|.|..||:.:.|.|:.||.|.|||.: ..|.|    
Zfish  1134 ALEQFDQKI--QPGASKLGEKKKKEQFRRLIAGTVGKPLAQQFKKEVHIRNLPSL-FKKPK---- 1191

  Fly  1220 TTADIMDSNQNASLARLFGPE 1240
            .|.|::::|::|:|..||.|:
Zfish  1192 PTKDLLENNEDATLISLFTPD 1212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp21NP_001285453.1 IBN_N 34..101 CDD:281761 27/66 (41%)
Xpo1 116..274 CDD:285575 78/158 (49%)
xpo5XP_017214411.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 336 1.000 Domainoid score I1091
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69316
Inparanoid 1 1.050 555 1.000 Inparanoid score I1085
OMA 1 1.010 - - QHG55404
OrthoDB 1 1.010 - - D203278at2759
OrthoFinder 1 1.000 - - FOG0003520
OrthoInspector 1 1.000 - - oto39483
orthoMCL 1 0.900 - - OOG6_103801
Panther 1 1.100 - - LDO PTHR11223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4056
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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